From Lamprey to Lake Trout: Things to Consider in Database PlanningTreble, Andrew
On the other hand, the classical parapinopsin genes are not found in the genome database of the elephant shark, suggesting that it was lost during the evolutionary process. In general, opsins vary in spectral sensitivity and activating G protein subtypes. Our result suggests that bPPL activates...
Database 2015, bav038 (2015). PubMed PubMed Central Google Scholar Raj, B. et al. Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain. Nat. Biotechnol. 36, 442–450 (2018). CAS PubMed PubMed Central Google Scholar Welch, J. D. et al. Single-...
After tryptic peptide mass acquisition, mass fingerprinting searching was carried out in Swiss-Prot and NCBInr database using MASCOT (Matrix Science, Ltd., London, UK, http://www.matrixscience.com) online available software. Cloning of full-length LPFP cDNA and 3D structure prediction of protein...
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The size of lamprey genomes varies from 40% to 70% of the human genome size, depending on the species considered and the methods of analysis used. Hagfish genomes tend to be larger, from 65% to 130% of the human genome size (Animal Genome Size Database,www.genomesize.com). This gives...
Two different sequences were blasted against the GenBank database and showed similarity to MC receptors. The clones were used for high stringency screening of a river lamprey genomic library. Two positive cosmid clones were isolated and sequenced. Both clones were found to contain the same intron...
The sea lamprey ABC gene sequences have been deposited in GenBank database (accession numbers: KM232912–KM232947) whereas the Japanese lamprey ABC gene sequences are included within the Additional file 2.Abbreviations ABC: ATP-binding cassette TMD: Transmembrane domain NBD: Nucleotide-binding ...
Tethys has character, imperfections and noise cast into the samples themselves, and multiple velocity layers to help soften the harshness often found in software-based Synths. The Library contains 16 patches which can be loaded into one of 3 samplers. It also includes a random-patch button to ...
By searching the Molecular Signatures Database (MSigDB v2023.2.Mm) and reviewing relevant literature, we obtained a gene set that is associated with the regulation of endothelial cell metabolism. Subsequently, we performed a bidirectional best-hit comparison of genes between the lamprey and mice and...