这里模拟一个富集分析结果的假数据,使用R来演示绘图。 library(ggplot2)# mock datadata = data.frame(KEGGMainClass = c('Metabolism','Genetic Information Processing','Environmental Information Processing','Cellular Processes','Human Diseases'),EnrichmentScore = c(12, 15, 30, 24, 20),GeneCount = c...
KEGG代谢通路中文翻译 1.0Globalandoverviewmaps 1.0全局和总览图 01100Metabolicpathways 01110Biosynthesisofsecondarymetabolites 01120Microbialmetabolismindiverse environments01200 Carbonmetabolism01210 2-Oxocarboxylicacidmetabolism01212 Fattyacidmetabolism01230 Biosynthesisofaminoacids01220 Degradationofaromaticcompounds 01100...
Interpreting and querying metabolic pathway diagrams involves two types in KEGG: reference pathways and species-specific pathways. The former, represented by white boxes and prefixed with "map" (e.g., map00061 for fatty acid biosynthesis), serve as a general reference with enzyme repre...
ko01200 Carbon metabolism Metabolism Global and overview maps ko01210 2-Oxocarboxylic acid metabolism Metabolism Global and overview maps ko01212 Fatty acid metabolism Metabolism Global and overview maps ko01230 Biosynthesis of amino acids Metabolism Global and overview maps 解析python脚本: import re, os...
map00061 Fatty acid biosynthesis map00062 Fatty acid elongation in mitochondria map00071 Fatty acid metabolism map00072 Synthesis and degradation of ketone bodies map00100 Steroid biosynthesis map00120 Primary bile acid biosynthesis map00121 Secondary bile acid biosynthesis map00130 Ubiquinone and other terpen...
Fattyacidmetabolism, 脂肪酸代谢 01230,01230 Biosynthesisofaminoacids, 氨基酸的生物合成 01220,01220 Degradationofaromaticcompounds, 芳香化合物的降解 1.1Carbohydratemetabolism,1.1碳水化合物代谢 00010,00010 Glycolysis/Gluconeogenesis,糖酵解/糖异生 00020,00020 Citratecycle(TCAcycle),柠檬酸盐循环(TCA循环) 00030...
head -5 hsa.ko2pathway# hsa01100 Metabolic pathways - Homo sapiens (human)# hsa01200 Carbon metabolism - Homo sapiens (human)# hsa01210 2-Oxocarboxylic acid metabolism - Homo sapiens (human)# hsa01212 Fatty acid metabolism - Homo sapiens (human)# hsa01230 Biosynthesis of amino acids - Homo ...
Lipid Metabolism 00061 Fatty acid biosynthesis 00062 Fatty acid elongation in mitochondria 00071 Fatty acid metabolism 00072 Synthesis and degradation of ketone bodies 00100 Steroid biosynthesis 00120 Primary bile acid biosynthesis 00121 Secondary bile acid biosynthesis 00140 Steroid hormone biosynthesis ...
00061 Fatty acid biosynthesis 00062 Fatty acid elongation in mitochondria 00071 Fatty acid metabolism 00072 Synthesis and degradation o ketone bodies 00100 Steroid biosynthesis 00120 Primary bile acid biosynthesis 00121 Secondary bile acid biosynthesis ...
KEGG_PATHWAY hsa01040:Biosynthesis of unsaturated fatty acids 7 0.34739454094292804 0.07176738086075987 ELOVL1, HACD1, ACOX1, TECR, ELOVL6, HACD3, ACAA1 964 27 8662 2.3295681573689873 0.9999999999913177 0.25836257109873556 0.2228566037255175 KEGG_PATHWAY hsa04210:Apoptosis 22 1.0918114143920596 0.07409866587259481...