JASPAR (http://jaspar.genereg.net) is an open-access database of curated, non-redundant transcription factor (TF)-binding profiles stored as position frequency matrices (PFMs) for TFs across multiple species in six taxonomic groups. In this 8th release of JASPAR, the CORE collection has been...
EditorialDecisionOctober16,2019;AcceptedOctober16,2019 ABSTRACT JASPAR(http://jaspar.genereg.net)isanopen- accessdatabaseofcurated,non-redundanttran- scriptionfactor(TF)-bindingprofilesstoredasposi- tionfrequencymatrices(PFMs)forTFsacrossmul- tiplespeciesinsixtaxonomicgroups.Inthis8th releaseofJASPAR,...
Editorial Decision October 16, 2019; Accepted October 16, 2019ABSTRACTJASPAR (http://jaspar.genereg.net) is an open-access database of curated, non-redundant tran-scription factor (TF)-binding prof i les stored as posi-tion frequency matrices (PFMs) for TFs across mul-tiple species in six...
T2T.JASPAR2022_CORE_vertebrates_non_redundant_v2.RData T2T CTCF motifs detected using human PWM matrices from https://jaspar.genereg.net/, by FIMO T2T Homo sapiens 9606 JASPAR 2022 3,196,774 2,538,458 75,126 64,767 T2T.Jolma2013.RData T2T CTCF motifs detected using PWM matrices from ...
首先通过MEME和DREME两款软件预测de novo motif, 然后利用CentriMo识别在序列的中心区域显著富集的motif, 同时采用Tomtom软件将预测到的de novo motif与指定数据库的已知...命令行版本的基本用法如下 meme-chip \ -meme-p 6 \ -oc out_dir \ -db JASPAR2018_CORE_non-redundant.meme \ input.fna...其中-mem...
JASPAR 数据库是一个转录因子结合位点的motif的数据库基本信息 外文名 JASPAR The JASPAR CORE database contains a curated, non-redundant set of profiles, derived from published collections of experimentally defined transcription factor binding sites for eukaryotes. The prime difference to similar resources (...
JASPAR (http://jaspar.genereg.net) is an open-access database storing curated, non-redundant transcription factor (TF) binding profiles representing transcription factor binding preferences as position frequency matrices for multiple species in six taxonomic groups. For this 2016 release, we expanded ...
JASPAR (http://jaspar.genereg.net) is an open-access database of curated, non-redundant transcription factor (TF)-binding profiles stored as position frequency matrices (PFMs) for TFs across multiple species in six taxonomic groups. In this 8th release of JASPAR, the CORE collection has been...
JASPAR (http://jaspar.genereg.net) is an open-access database of curated, non-redundant transcription factor (TF)-binding profiles stored as position frequency matrices (PFMs) for TFs across multiple species in six taxonomic groups. In t... F Oriol,Castro-Mondragon Jaime A,K Aziz,... -...