Long inverted repeats (LIRs) have been shown to induce genomic deletions in yeast. In this study, LIRs were investigated within ±10kb spanning each breakpoint from 109 human gross deletions, using Inverted Repeat Finder (IRF) software. LIR number was significantly higher at the breakpoint ...
This unusual (10.8 kbp) duplication found in Sudan isolates 1 and 2 is composed of open reading frames of several host immune modulator genes (MPXV_Zaire_1979-005 open reading frames 5-16) and some fragments of the inverted terminal repeats. This duplication was partially lost in 1 of the...
repeats, by using sequence homology and theTandem RepeatFinderprogram (Benson, 1999). The main outputs of the program are a global annotation of the repeats that are present in the query sequence as well as a modified version of the query sequence in which all the annotated repeats have been...
LTIR Long-Term Injured Reserve (professional sports) LTIR Licensed Trustee in Insolvency and Restructuring (Canada) LTIR Longer Term Investment Return LTIR Long Terminal Inverted Repeats (genetics) Copyright 1988-2018 AcronymFinder.com, All rights reserved. Suggest new definitionWant...
Tandem repeats were analyzed using Tandem Repeats Finder (http://tandem.bu.edu/trf/trf.submit.options.html) with the basic model. All of the repeats found were manually verified, and the nested or redundant results were removed. Phylogenetic analyses were performed on three data sets. The ...
A previous study using a different algorithm (Inverted Repeat Finder) and with different parameters, demonstrated that S. cerevisiae chromosomal IRs are clustered in intergenic regions [23] and a correlation between IRs and the polyadenylation signal was shown recently [16]. Here, using Palindrome ...
TIRfinder: A Web Tool for Mining Class II Transposons Carrying Terminal Inverted Repeats M, Walczak K, Paszek J, Grzebelus D, Gambin A (2013) TIRfinder: a web tool for mining class II transposons carrying terminal inverted repeats. Evol... T Gambin,M Startek,K Walczak,... - 《...
Long inverted repeats (LIRs) have been shown to induce genomic deletions in yeast. In this study, LIRs were investigated within 卤10kb spanning each breakpoint from 109 human gross deletions, using Inverted Repeat Finder (IRF) software. LIR number was significantly higher at the...
TIRfinder: A Web Tool for Mining Class II Transposons Carrying Terminal Inverted Repeats. Evolutionary Bioinformatics. 2013; 9:17. https://doi.org/10.4137/EBO.S10619Gambin T, Startek M, Walczak K, Paszek J, Grzebelus D, Gambin A (2013) TIRfinder: a web tool for mining class II ...
TIRfinder: A Web Tool for Mining Class II Transposons Carrying Terminal Inverted Repeats. Evolutionary Bioinformatics. 2013; 9:17. https://doi.org/10.4137/EBO.S10619Gambin T, Startek M, Walczak K, Paszek J, Grzebelus D, Gambin A (2013) TIRfinder: a web tool for mining class II ...