Levi, N. McGinnis, B.M. Hill No community can do everything: why people participate in similar online communities Proc. ACM on Hum.-Comp. Inter., 6 (2022), pp. 1-25, 10.1145/3512908 Google Scholar [21] J.P. Carpenter, S.A. Morrison, M. Craft, M. Lee How and why are ...
GO enrichment analysis is a very important bioinformatics analysis, through which researchers can observe the enrichment of genes encoding of TMPs or nonTMPs, and make out gene products in molecular function (MC), biological process (BP), and Cellular Component (CC) of GO enriched terms. KEGG ...
Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin. Microbiome. 2018;6:1–17. McMurdie PJ, Holmes S. phyloseq: an R package for reproducible interactive analysis and graphics of microbiome census data. PLoS One. 2013;8: e61217. ...
Aside from jQuery make sure you have loaded the Greensock Animation Plattform (TweenMax). To use ScrollMagic in your project simply include the plugin js file in the head section of your HTML file: For deployment use the minified version instead: And to have access to the debugging extensi...
COVID-19 has become a global pandemic caused by the SARS-CoV-2 coronavirus. SARS-CoV-2 shares many similarities with SARS coronavirus (SARS-CoV). A viral r
The MCODE plugin is employed on the interaction network to obtain the top two subnetworks (based on MCODE Score of 5.438 and 5.417) to carry out transcription factor (TF) analysis, respectively. The top BC carcinogenic conditions in which the highly expressed hub genes (cut-off degree of 30...
Internalization of NG2 was quantified from the NG2/type VI collagen confocal immunofluorescent images using the Analyze Particles plugin in ImageJ40. The cytosol of an individual cell was defined by a region of interest inside of the pericellular type VI collagen. NG2 colocalized with type VI...
perturb the expression of actin-interacting proteins such as Talin-1, Zyxin and α-Actinin-1, resulting in changes in actin cytoskeleton polymerization, as well as FN-1 deposition and organization, with both processes leading to reduced α5β1 integrin activation and diminished EOC cell/MC ...
(Mcode) plugin75in Cytoscape was adopted to identify the most important modules, as shown in Fig.9d. Further, the top three hub genes were selected by the Cytohubba plugin in Cytoscape76using the MCC method76. As shown in Fig.9e, the top three hub genes wereNDUFA12, NDUFB9 and NDU...
Network analysis was performed by the Reactome FI Functional Interaction Network plugin for Cytoscape76,77. The matching and retrieving of genomic intervals of up- or downregulated genes with genomic regions (obtained by EDD) were performed by list comparison software developed in-house. The ...