Oryzabase is a comprehensive rice science database established in 2000 by a rice researchers' committee in Japan. The database originally aimed at collecting information ranging from classical rice genetics to structural and functional genomics. The current Oryzabase consists of five parts: (1) ...
3.1. Rice and fish yield in rice–fish coculture The rice yield and fish weight were increased and related data were provided in Table 1. Rice yield was higher in RF (0.92 kg/m2) than in RM (0.52 kg/ m2). Average fish weight is also increased significantly in RF1 (95.7...
Yuenong Simiao (YN) is a major rice cultivar in South China and exhibits a strong anti-senescence phenotype at the late-mature stage. To explore the underlying molecular mechanisms of the anti-senescence of YN, we performed transcriptomic and metabonomic analyses of the flag leaves of YN as we...
Maize Cell Genomics Database (MAGIC) http://maize.jcvi.org/cellgenomics/index.php Maize images tagged with PO terms Manually Curated Database of Rice Proteins http://www.genomeindia.org/biocuration/ Browse annotated data by PO, PECO, TO or GO term Metabolomic Repository Bordeaux (MeRy-B) htt...
Rice is one of the most important stable food as well as a monocotyledonous model organism for the plant research community. Here, we present RED (Rice Expression Database; http://expression.ic4r.org), an integrated database of rice gene expression profiles derived entirely from RNA-Seq dat...
To promote functional genomics research of sesame, we collected genetic information combined with comprehensive phenotypic information and integrated them in the web-based database named SesameFG. The current version of SesameFG contains phenotypic information on agronomic traits of 705 sesame accessions, ...
Before launching the vAMPirus.nf, be sure to run the vampirus_startup.sh script to install dependencies and/or databases (NOTE: You will need to have the xz program installed before running startup script when downloading the RVDB database) Test the vAMPirus installation with the provided tes...
ECD--a totally integrated database of Escherichia coli K12. We have compiled the DNA sequence data for E. coli available from the GENBANK and EMBL data libraries and independently from the literature. Starting with ... R Wahl,P Rice,CM Rice,... - 《Nucleic Acids Research》...
Among them, the trait data for rice is categorized into two groups: the Trait (T) group and the Experiment condition (E) group. Specially, our comprehensive platform offers an intuitive landscape of crop traits, allowing users to browse data from both the gene and phenotype perspectives, while...
The pigeon food production industry from breeding to processing into food for market circulation involves many stages and people, which is prone to food safety issues and difficult to regulate. To address these problems, one possible solution is to estab