Install Rtools (https://cran.r-project.org/bin/windows/Rtools/).Then use the pkgbuild package, or make sure that Rtools in the PATH.2:In i.p(...) :installation of package ‘C:/Users/ADMINI~1/AppData/Local/Temp/Rtmpw9bH6E/remotes3878357a1a/Seurat’ had non-zero exit status Insta...
> install.packages("Seurat", repos = c("https://seurat.nygenome.org/", "https://cloud.r-project.org")) also installing the dependency ‘SeuratObject’ Warning in install.packages : unable to access index for repository https://seurat.nygenome.org/bin/macosx/contrib/4.2: cannot open URL...
unzip seurat-wrappers-master.zip tar-zcvfSeuratWrappers_0.3.1.tar.gz./seurat-wrappers-master 然后在R中安装: ##使用remotes安装仍然报错 r$>remotes::install_local('~/r_packages//SeuratWrappers_0.3.1.tar.gz')Error:Failed to install'SeuratWrappers' from local:Failed to connect to api.github.com ...
ERROR: lazy loading failed for package ‘SeuratWrappers’ removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/SeuratWrappers’ Error: Failed to install 'SeuratWrappers' from GitHub: (converted from warning) installation of package ‘/var/folders/k6/kc8fk3c56j5d_msh9ttjvjxr0000...
ErrorinloadNamespace(name):thereisnopackagecalled ‘pbmcMultiome.SeuratData’ 此外:There were37warnings(usewarnings()tosee them) 于是在服务器上先通过链接下载数据集: cd /local/txm/software/SeuratData wget http://seurat.nygenome.org/src/contrib/pbmcMultiome.SeuratData_0.1.0.tar.gz --no-check...
loadNamespace中更新后R的使用问题 、、、 我对R非常陌生,主要是用Seurat软件包来评估我的单细胞RNAseq数据。今天,我想更新R版本和RStudio。之后,我在使用已安装的软件包时遇到了问题。这是我的问题:Installing package into ‘C:/Users/benne/AppData/Local/R/win-library 浏览...
* removing 'C:/Program Files/R/R-3.6.0/library/stringi' Warning in install.packages : installation of package ‘stringi’ had non-zero exit status Warning in system("sh ./configure.win") : 'sh' not found ERROR: configuration failed for package 'stringi'...
1: In install.packages("Seurat") : installation of package ‘rgeos’ had non-zero exit status 2: In install.packages("Seurat") : installation of package ‘igraph’ had non-zero exit status 3: In install.packages("Seurat") : installation of package ‘leiden’ had non-zero exit status ...
R version 4.1.1 (2021-08-10) -- "Kick Things" Platform: x86_64-w64-mingw32/x64 (64-bit) I tried installing pacakge SeuratDisk with install.packages in R version 4.1.1, but installation failed saying package ‘SeuratDisk’ is not available for this version of R. Following is the com...
Following advice here,satijalab/seurat-object#165 In RStudio, I am trying to install an earlier version of sctransform 0.3.5. to replicate analyses with an earlier version of Seurat (Seurat 4.2.0 and SeuratObject 4.1.3). Specifically, I have tried this step that fails to install sctransform...