安装BiocManager包(如果尚未安装): 在R控制台中输入以下命令来安装BiocManager包:R install.packages("BiocManager") 这将从CRAN镜像站点下载并安装BiocManager包。如果已安装,此步骤可以跳过。 加载BiocManager包: 在R控制台中输入以下命令来加载BiocManager包:R...
R语言包的安装方法有很多,对于生信分析而言目前笔者亲测两种方法最有效。 以下以'impute'包为例进行演示,其他包方法类似(特殊的包除外) 一、常规方法 首先尝试 install.packages('impute') 结果是安装结束后运行这个包依然显示:该包不存在 二、生信安装方法! #install.packages('BiocManager') ##如果预先没有装过...
install.packages("BiocManager")BiocManager::install("LDlinkR",ask=F,update=F)1. conda安装(推荐...
'getOption("repos")'replaces Bioconductor standard repositories,see'?repositories'fordetails replacement repositories:CRAN:https://cloud.r-project.org Bioconductor version3.14(BiocManager1.30.16),R4.1.1(2021-08-10)Installingpackage(s)'HDCytoData'also installing the dependencies'Biostrings','KEGGREST','...
https://cran.r-project.org/doc/manuals/r-patched/R-admin.html#Installing-packages>BiocManager::install('FlowSOM')'getOption("repos")'replaces Bioconductor standard repositories,see'?repositories'fordetails replacement repositories:CRAN:https://cloud.r-project.org ...
>BiocManager::install("stringi",ask = F,update = F)'getOption("repos")' replaces Bioconductor standard repositories, see '?repositories' for details replacement repositories: CRAN: https://cran.rstudio.com/Bioconductor version 3.10 (BiocManager 1.30.16), R 3.6.0 (2019-04-26)Installing package...
method = 'libcurl')就轻轻松松解决啦,不过这次居然是仅仅是解决了R自带R包下载问题,使用BiocManager...
I have R version 3.5.1. After installing BiocManager, I tried to install bioconductor and I obtin the following error: BiocManager::install() Error: invalid version specification ‘Bioconductor version cannot be validated; no internet connection?....
BiocManager::install("seqinr")时报错 make: *** [surfaceArea.o] Error 1 ERROR: compilation failed for package ‘sp’ * removing ‘/share/work/biosoft/R/R-v4.2.2/lib64/R/library/sp’ * installing *source* package ‘Rcpp’ ... make...
># construct SingleCellExperiment>#BiocManager::install("CATALYST")>library(CATALYST)Error inlibrary(CATALYST):不存在叫‘CATALYST’这个名字的程辑包>BiocManager::install("CATALYST")'getOption("repos")'replaces Bioconductor standard repositories,see'?repositories'fordetails ...