The IMGT/HLA Database is a specialist database for sequences of the human major histocompatibility (MHC) system. It includes all the HLA sequences officially recognised and named by the WHO Nomenclature Committee for Factors of the HLA System. The database provides users with online tools and ...
sequence-searchwgshlahla-databaseimgthla-typing UpdatedMay 21, 2019 Java WansonChoi/HATK Star26 Code Issues Pull requests A collection of modules to process and analyze IMGT-HLA sequences. hlaimgtfine-mapping UpdatedDec 18, 2022 Parrot
include all the publicly available sequences officially named by the WHO Nomenclature Committee at the time of release. The database was first available as the HLA Sequence Databank (HLA-DB) (6), which allowed the periodic pub-
The IPD-IMGT/HLA Database, http://www.ebi.ac.uk/ipd/imgt/hla/, currently contains over 25 000 allele sequence for 45 genes, which are located within the Major Histocompatibility Complex (MHC) of the human genome. This region is the most polymorphic region of the human genome, and the ...
The IPD-IMGT/HLA Database enhanced this work by providing the HLA community with an online, searchable repository of highly curated HLA sequences. Many of the genes encode proteins of the immune system and are hyper polymorphic, with some genes currently having over 4000 known allelic variants....
database, HATK builds a marker panel including not only the typical intergenic genomic variants(i.e. SNPs) markers but also variants of HLA region. Also, HATK provides the additional association test method so that researchers can analyze the signals arising in the amino acid sequence position....
The IPD-IMGT/HLA Database - New developments in reporting HLA variation. IPD-IMGT/HLA is a constituent of the Immuno Polymorphism Database (IPD), which was developed to provide a centralised system for the study of polymorphism ... J Robinson,AR Soormally,JD Hayhurst,... - 《Human ...
IMGT comprises three databases: LIGM-DB, a comprehensive database of Ig and TcR, MHC/HLA-DB, and PRIMER-DB (the last two in development); a tool, IMGT/DNAPLOT, developed for sequence analysis and alignments; and expertised data based on the IMGT scientific chart, the IMGT repertoire. By...
The IMGT/HLA database ( http://www.ebi.ac.uk/imgt/hla ) has provided a centralized repository for the sequences of the alleles named by the WHO Nomenclatur... R James,MJ Waller,P Peter,... - 《Nucleic Acids Research》 被引量: 1880发表: 2003年 IMGT/HLA and IMGT/MHC: sequence dat...
'Exp. ID' is the identifier of the 'IMGT clonotype (AA)' in the data set. The IMGT clonotype (AA) definition includes the names of the V, D, J genes and alleles, the CDR3-IMGT length (AA), the CDR3-IMGT sequence (AA) and the anchors 104 and 118 of the junction 'C, F' (...