The Human Protein Atlas contains images of histological sections from normal and cancer tissues obtained by immunohistochemistry. Antibodies are labeled with DAB (3,3'-diaminobenzidine) and the resulting brown staining indicates where an antibody has bou
In this paper we present the design and analysis of the results from the competition Human Protein Atlas – Single-Cell Classification hosted on the Kaggle platform (https://www.kaggle.com/c/hpa-single-cell-image-classification). Given images, image-level labels and pretrained segmentation models...
Human Protein atlas: https://www.proteinatlas.org/ Tabula Sapiens: https://tabula-sapiens-portal.ds.czbiohub.org/ UCSC Cell Browser: https://cells.ucsc.edu/ Supplementary information Supplementary Information Glossary Cell state Intermediate, hybrid or transitional state acquired by the cell types ...
A gene atlas of the mouse and human protein-encoding transcriptomes The tissue-specific pattern of mRNA expression can indicate important clues about gene function. High-density oligonucleotide arrays offer the opportunity ... AI Su,T Wiltshire,S Batalov,... - 《Proceedings of the National Academy...
Data from the Human Protein Atlas [24] (HPA) are not appropriate for completing ours as they derive from a biased a priori selection of proteins and antibody availability. Antibody-based assays can also be very variable in their sensitivity, thus making expression profiles of different proteins ...
The resulting data have been made available in an open-access Brain Atlas resource, part of the Human Protein Atlas, to allow exploration and comparison of the expression of individual protein-coding genes in various parts of the mammalian brain. ...
Inhibition of cell-free protein synthesis by pppA2'p5'A2'p5'A: a novel oligonucleotide synthesized by interferon-treated L cell extracts. Cell 13, 565−572 NICKERSON P ET AL: "Proliferation and Expression of Progenitor and Mature Retinal Phenotypes in the Adult Mammalian Ciliary Body after ...
Consistent with immunohistochemical staining from the Human Protein Atlas (Figure 6C) (Uhlén et al., 2015), we found enriched expression of filaggrin (FLG), a protein in the outer layers of the epidermis (Sandilands et al., 2009), among keratinocytes that lie at the terminal points in the...
Börner, and colleagues summarized significant accomplishments made, along with notable challenges encountered, during the first phase of HuBMAP in a Nature Cell Biology paper published last year (DOI: 10.1038/s41556-023-01194-w). The paper also looked ahead to future goals and possibilities....
This paper describes the outcome of the HPA Image Classification competition at Kaggle (https://www.kaggle.com/c/human-protein-atlas-image-classification/), which was active from 3 October, 2018 to 10 January, 2019. The top-ranking solutions were awarded with a cash prize (Table1, first pla...