The visual approaches perform better than statistical tests. For example, the Shapiro-Wilk test has low power for small sample size data and deviates significantly from normality for large sample sizes (say n > 50). For large sample sizes, you should consider to use QQ-plot for normality assu...
You can use Homebrew (brew) to install, uninstall, and upgrade any of thousands of “formulae” (i.e. package definitions) from its core public repository, plus anytaprepositories you care to use. You can also use the Homebrewcaskfacility (brew-cask) as a way to install, uninstall, and...
I would not use Biopython for this. I recommend using standard Unix tools that are fast and flexible. I would not use a hammer to open a jar. VOTE David BangleyFollow Here is a fun little python script I cooked up for the occasion. It will take a standard fasta file as a comman...
You will have to first create the fasta indexes of the reference genome fasta file and then use this command. [3]python implementation of faidxto GitHub. https://github.com/mdshw5/pyfaidx [4]UCSCtwoBitToFa useucsctwoBitToFainhttp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/ see a...
I use Ubuntu, because it comes pre-loaded with everything needed to install conda (for example python 3.5), but most distributions should be OK.If you use a distribution other than Ubuntu, ensure that it has the following programs installed:...
Use Homebrew to install a package As a basic example, let’s try installingwgetwith Homebrew. First, launch Terminal. The installation command is just as listed in the image above:brew install wget. On my machine, it produced the rather lengthy output below. Note that the installation began ...
Use Homebrew to install a package As a basic example, let’s try installingwgetwith Homebrew. First, launch Terminal. The installation command is just as listed in the image above:brew install wget. On my machine, it produced the rather lengthy output below. Note that the installation began ...