最好截个图发上来。如果文件太大，记事本打开会有困难。那就下载一个ultraEdit或者gVIM打开 ...
--domT <x> : report domains >= this score cutoff in output 在结果中报告大于这个分数的domain Options controlling inclusion (significance) thresholds: 控制包含(显著性)阈值的参数: --incE <x> : consider sequences <= this E-value threshold as significant ...
the per-sequence threshold <x1> and the per-domain threshold <x2> These act as if-T<x1>--incT<x1>--domT<x2>--incdomT<x2>has been applied specifically using each model's curated thresholds.--cut_gaUse the GA (gathering) bit scores in the model to set per-sequence (GA1) and ...
算法 1 Viterbi Plan7 动态规划算法 输入 状态数为 M 的 HMM 模型和长度为 L 的蛋白质序列,模 型由字符生成概率 e(S,i)和状态迁移概率 t(S1,S2)组成 输出 比对分值 Score for or i=1,L do for k=1,M do M(i,k)=e(Mk,Seq[i])+max{M(i-1,k-1)+t(Mk-1,Mk),I(i-1,k-1)+t(Ik...
(Mk+1,E) 1 k k+1 k k k k+1 k k+1 k k+1 k k+1 k k+1 k+1 k+ 1 t(Mk+1,Ik+1) t(Ik+1,Ik+1) 2 2 3 V(i,k)cell-PE write write write write M(i,k)V(i+1,k) E calc E calc E calc E calc cell-PE M(i-1, k) M/I/D calc M/I/D calc M/I/D ...
基于序列划分策略的Hmmsearch程序两级并行实现 维普资讯 http://www.cqvip.com
out for reading 无法生成.out文件 fa后缀换成fasta不行，下载了embl格式的txt也不行，哭了 ...
(Mk+1,E) 1 k k+1 k k k k+1 k k+1 k k+1 k k+1 k k+1 k+1 k+ 1 t(Mk+1,Ik+1) t(Ik+1,Ik+1) 2 2 3 V(i,k)cell-PE write write write write M(i,k)V(i+1,k) E calc E calc E calc E calc cell-PE M(i-1, k) M/I/D calc M/I/D calc M/I/D ...