我个人感觉其他格式,我们的用的还是很少吧,主要还是fa格式。 $hmmsearch-h#hmmsearch::searchprofile(s)againstasequencedatabase#HMMER3.3.2(Nov2020);http://hmmer.org/#Copyright(C)2020HowardHughesMedicalInstitute.#FreelydistributedundertheBSDopensourcelicense.#---Usage:hmmsearch[options]<hmmfile><seqdb>Basic...
ClawHMMer: Streaming Protein Search-开源 开发技术 - 其它 蛊咒**蛊咒上传469KB文件格式tgz 在这里,我们提供供下载的ClawHMMer,它是在商品图形上运行的hmmsearch的流媒体实现。 处理器和并行渲染集群。 原始HMMer版本位于http://hmmer.wustl.edu/(也在GPL下)。 (0)踩踩(0) 所需:1积分...
$ hmmsearch -h # hmmsearch :: search profile(s) against a sequence database # HMMER 3.3.2 (Nov 2020); http://hmmer.org/ # Copyright (C) 2020 Howard Hughes Medical Institute. # Freely distributed under the BSD open source license. # - - - - - - - - - - - - - - - - - -...
HMMER is often used together with a profile database, such asPfamor many of the databases that participate inInterpro. But HMMER can also work with querysequences, not just profiles, just like BLAST. For example, you can search a protein query sequence against a database withphmmer, or do...