Prediction of the sequence ... SE Hamby,JD Hirst - 《Bmc Bioinformatics》 被引量: 238发表: 2008年 Glycosylation site prediction using ensembles of Support Vector Machine classifiers Glycosylation is one of the most complex post-translational modifications (PTMs) of proteins in eukaryotic cells. ...
In silico-based protein prediction assay using ExPaSy tool (http://web.expasy.org/ translate) shows that skipping of exon 10 causes a frameshift beginning at amino acid 340 and introducing a stop codon after 56 amino acids downstream in the major splice form a, NP_079016.2:(p. Val340Alafs...
while a red cross mark indicates that the site is predicted to be unoccupied by Re-Glyco owing to major steric clashing.c, Bottom: the 3D structure of the EXTL3 monomer from AlphaFold (AF-O439
Basic biochemical properties of the target proteins were determined using ProtParam Tool from Expasy service (https://web.expasy.org/protparam/). Prediction of N- and O-glycosylation sites, and the disulfide bonds formation combinations was conducted using NetNGlyc and NetOGlyc tools at http://www....
We use essential cookies to make sure the site can function. We also use optional cookies for advertising, personalisation of content, usage analysis, and social media. By accepting optional cookies, you consent to the processing of your personal data - including transfers to third parties. Some...
Given the sequences of a pair of viruses, i and j, a scoring function is proposed to predict the antigenic distance between them. Suppose virus i and j are from clustersCiandCj, then, we define our prediction model as $$ \hat{\mathrm{y}}=\mathrm{x}\left(\upmu {\mathrm{w}}^{\...