p.adjust.method="bonferroni")%>%adjust_pvalue()%>%add_significance("p.adj")%>%add_xy_position()res.aov<-ToothGrowth%>%mutate(dose=as.factor(dose))
remotes::install_github("csdaw/ggprism") 添加P值 GraphPad Prism 9 已经支持自动添加P值了,因此ggprism也增加了add_pvalue函数,添加P值和显著性标记。 这个函数其实是对stat_pvalue_manual函数的重写,stat_pvalue_manual又是基于ggsignif包写的,所以掌握了ggsignif,你就掌握了R语言添加显著性标记的技能。 基本...
stat.test <- df %>% group_by(dose) %>% t_test(len ~ supp) %>% adjust_pvalue(method = "bonferroni") %>% add_significance("p.adj") stat.test 使用gghubr画图,并添加p值 add_xy_position用于确定添加p值的位置,也可以用add_y_position()代替 scale_y_continuous 用于扩展Y坐标。下面代码中...
ggsurv <- ggsurvplot(fit, data = colon, palette ="jco",#jco palettepval =TRUE, pval.coord=c(500,0.4), #Add p-value risk.table =TRUE#Add risk table) names(ggsurv) ## [1]"plot""table""data.survplot""data.survtable" ggsurv是一个包含两部分的list plot:生存曲线 table:风险表 可以...
#Atibble:3x9dose.y.group1 group2 statistic p method p.adj y.position10.5lenOJVC3.16973280.0064T-test0.01283521.0lenOJVC4.03276960.0010T-test0.00303532.0lenOJVC-0.04613610.9600T-test0.960035# Create a box plot and add the p-value p<-ggboxplot(ToothGrowth,x="supp",y="len",color="supp",...
pval=TRUE,pval.coord=c(500,0.4),# Add p-value risk.table=TRUE # Add risk table)names(ggsurv) ggsurv 是一个包含以下两个部分的列表: plot:生存曲线 table:风险表图 绘制生存曲线和风险表: ggarrange(ggsurv$plot, ggsurv$table, heights = c(2, 1), ...
add = "jitter", shape = "dose") p 图片.png # Add p-values comparing groups# Specify the comparisons you wantmy_comparisons<-list(c("0.5","1"),c("1","2"),c("0.5","2"))p+stat_compare_means(comparisons=my_comparisons)+# Add pairwise comparisons p-valuestat_compare_means(label....
Add mpg values as label.label = “mpg”orlabel = round(dfm$mpg). ggdotchart(dfm, x="name", y="mpg",color="cyl",# Color by groupspalette=c("#00AFBB","#E7B800","#FC4E07"),# Custom color palettesorting="descending",# Sort value in descending orderadd="segments",# Add segments...
5,type = "discrete",direction = -1) color_value =c( "Total Asia Pacific(China NOT included...