Since Latin America had been free of cholera epidemics for 96 years, and because the major epidemics seen in the 1990s and in 2010 are attributed to the introduction of epidemic 7PET sub-lineages originating in South Asia7, Latin America presented a unique opportunity to understand the longitudin...
The Robusta and Eugenioides genomes contained, respectively, 67.5% and 59.7% TEs (Supplementary Section3.2), with Gypsy long terminal repeat (LTR) retrotransposons accounting for most of the difference between the two species. This difference was greatly reduced (63.1% and 63.8%) in the two Arabic...
To enable experimental dissection of these components in the human, we performed genome-wide profiling of the transcriptomes of peripheral blood mononuclear cells (PBMC) in patients with rare defined "disorders of sex development" (DSD, e.g., 46, XY-females due to defective androgen biosynthesis)...
In the last decade, the rise of affordable high-throughput sequencing technologies has led to rapid advances across the biological sciences. At the time of writing, annotated reference genomes are available for most clades of eukaryotic pathogens. Over 5
• studies_included [This is a piece of text that is Y if it is in the study and N if it is not. For example if the variant was in all three studies it would read Y:Y:Y (with UK first, Chicago second and Colorado last), if it was in the UK and Chicago but not included ...
Genotypes for pMEI loci in 2504 individuals were extracted from the 1000 Genomes project phase 3 release of structure variation (ftp://ftp.1000genomes.ebi.ac.uk/vol1/ftp/phase3/integrated_sv_map/) [23, 24]. In this dataset, 16,631 pMEIs were present in certain samples but not in the...
That you have amended your sequence submission (BioSample) with contextual data following the checklist and recommendations of the MIxS standard (http://www.ebi.ac.uk/ena/submit/mixs-checklists). Geographic location, date and time of sampling, phenotypic (if available), physiological and biochemica...
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The sablefish (order: Scorpaeniformes) is an economically important species in commercial fisheries of the North Pacific and an emerging species in aquaculture. Aside from a handful of sequences in NCBI and a few published microsatellite markers, little is known about the genetics of this species...
Primers designed for unique and repetitive sequences allowed to reliably identify the sex of both larval and adult stages of the parasite. Conclusion Our genome-to-genome comparison method that we call "whole-genome in-silico subtractive hybridization" (WISH) allows for rapid identification of ...