Today, high-throughput techniques, availability of genomic data and advances in computational methods have made it possible to investigate the genomes of different organisms from various aspects. Iran is one of the few countries that is home to both dromedary and Bactrian camels. From the past to...
During the human genome project (HGP), the genomes of many other organisms, including many different phages, were also sequenced. The computational analysis of these genomic sequences led researchers to notice key features of CRISPR repeat and spacer elements. Firstly, the CRISPR sequences are ...
Previously, we published an analysis of 149 genomes of 78 different species isolated from the female bladder [14]. Several of the taxa found within the bladder microbiota are also inhabitants of the vaginal microbiota [14,21,22]. This led us to posit that the bacterial communities of these t...
These contigs were mainly single read sequences related to other organisms (Table 2). These nine contigs of the initial assembly could not be further arranged into a single circular molecule mainly for two reasons. Firstly, there were cases of misassembled contigs, and secondly there were cases...
"This is suggesting that there are a lot of these enzymes that might be helping organisms digest their food," said Emerling. The genetic evidence independently corroborates the conclusions paleontologists reached years ago based on the shapes of fossils and teeth from early mammals. ...
of polyploidy than their low latitude/altitude counterparts6,10,11,23. This trend is consistent with the different reproduction strategies (r- and K-strategies) commonly associated with different thermal regimes18. The rapid metabolism and high developmental rates of short-lived r-selected organisms ...
Until recently, genomes were typically assembled into fragments of a few megabases at best, but now technological advances in long-read sequencing enable the near-complete assembly of each chromosome — also known as telomere-to-telomere assembly — for many organisms. Here, we review recent ...
We present two phylogenies that accentuate different aspects of E. coli/Shigella genomic evolution: (i) one based on the compositions of all possible features of length l = 24 (8.4 million features), which are likely to reveal the phenetic grouping and relationship among the organisms and (ii...
aPhylogeny of the trypsin inhibitor encoding genes in five different legume species including lablab;branch thickness corresponds to bootstrap values and increases with higher bootstrap; tree is rooted with the most divergent sequence from Arabidopsis; outer blue connections: tandemly duplicated genes, ...
spinulosa. Further investigation is required to determine whether gene order has been so strictly maintained in other members of the Cyatheaceae and other non-arborescent ferns. In any case, it is clear that genome evolution after WGD has followed quite different trajectories in A. spinulosa and ...