To run the entire GeneMark-EP+ pipeline with a single command, use: cd full_run_example ../bin/gmes/gmes_petap.pl --seq ../Drosophila_melanogaster/data/genome.fasta.masked \ --EP --dbep ../Drosophila_melanogaster/data/family_excluded.fa --verbose --cores=16 ...
Figure 4: BRAKER pipeline C: training GeneMark-EP+ on protein spliced alignment, start and stop information, prediction with AUGUSTUS with that same information, in addition chained CDSpart hints. Proteins used here can be of any evolutionary distance to the target organism. Genome file and RNA-...
Figure 4: BRAKER pipeline C: training GeneMark-EP+ on protein spliced alignment, start and stop information, prediction with AUGUSTUS with that same information, in addition chained CDSpart hints. Proteins used here can be of any evolutionary distance to the target organism. Genome file and RNA-...