gene structure display server2.0网页一直打不开，各位大神有遇到过这样的问题吗？请问怎么解决的？@...
The gene structure analysis was performed using the online program Gene Structure Display Server (GSDS: http://gsds.cbi.pku.edu.cn)19. The cis-acting elements in the promoters of CsWOX genes were analyzed using the PlantCARE (http://bioinformatics.psb.ugent.be/webtools/plantcare/html/)20. ...
Exon-intron structure was analyzed by online tool Gene Structure Display Server (GSDS). Lengths of exons and introns ofGmPEPCgenes were exhibited proportionally as indicated by the scale on the bottom. The classification of soybean PEPCs was indicated by the phylogenetic relationship on the left. ...
Besides, the conserved motifs in HSF rice protein sequences were combed using online tool Multiple Em for Motif Elicitation (MEME Suite version 5.5.0) https://meme-suite.org/meme/tools/meme. Distribution of intron and exon size in OsHSF family genes Using the Gene Structure Display Server (...
(Accession URL:http://purl.org/phylo/treebase/phylows/study/TB2:S17847You). The exon/intron structures of thePP2Cgene candidates were examined using the online Gene Structure Display Server (GSDS:http://gsds.cbi.pku.edu.ch) based on their corresponding genomic sequences [61]. The conserved...
Gene structure and promoter analysis The coding sequences (CDS), gene sequences, and promoter sequences were retrieved for each PLC protein from the NCBI database. CDS sequences and gene sequences were analyzed by using Gene Structure Display Server 2.0 (http://gsds.cbi.pku.edu.cn/ )[54]...
Hidden Markov Model; MEME: Multiple EM for Motif Elicitation; BFU: Beijing Forestry University; CDS: coding sequence; GDR: genome database for Rosaceae; PI: protein isoelectric point; MW: molecular weight; GSDS: Gene Structure Display Server; TPM: transcripts per million; DAF: days after floweri...
Gene structure analysis The exon and intron structures of individual Hsp90 genes were illustrated using Gene Structure Display Server (GSDS, http://gsds.cbi.pku.edu.cn/) [44] by aligning the cDNA sequences with the corresponding genomic DNA sequences from Phytozome. Conserved motif analysis Funct...
To identify the functions similarity, we use the average function distance in the gene ontology structure among each group of similar genes. Lin method [16] is used to calculate function distance, i.e. similarity values, between each pair of functions in Gene Ontology structure. The similarity ...
Brown JH, Jardetzky TS, Gorga JC, Stern LJ, Urban RG, Strominger JL, Wiley DC: Three-dimensional structure of the human class II histocompatibility antigen HLA-DR1. Nature. 1993, 364 (6432): 33-39. 10.1038/364033a0. Article CAS PubMed Google Scholar Beck S, Trowsdale J: Sequence or...