git clone git@github.com:gao-lab/SLAT.gitcdSLAT pip install -e".[dev,docs]"pip install pyg_lib torch_scatter torch_sparse torch_cluster torch_spline_conv -f https://data.pyg.org/whl/torch-2.0.0+cu117.html Reproduce manuscript results ...
If this package is not installed, you can download it from Github. The MEME Suite (4.10.0 or later) (optional, only used when motifs are NOT in meme format) If this package is not installed, you can download it from MEME Suite release page.InstallationThe...
.github/workflows v0.2.2 May 21, 2022 .vscode v0.3.0 Aug 17, 2022 custom v0.2.0 Jan 25, 2022 data v0.3.0 Aug 17, 2022 docker Update links and dockerfiles Aug 28, 2022 docs Update index.po Aug 28, 2022 evaluation v0.2.0
["bioinformatics", "deep-learning", "graph-neural-network", "single-cell", "spatial-omics"] homepage = "https://github.com/gao-lab/SLAT" documentation = "https://slat.readthedocs.io/en/latest/" repository = "https://github.com/gao-lab/SLAT" classifiers = [ "Intended Audience :: ...
Spatial-Linked Alignment Tool. Contribute to gao-lab/SLAT development by creating an account on GitHub.
Files main PASSAGE data tutorial tutorial.ipynb LICENSE README.md model.png passage_environment.yaml setup.pyBreadcrumbs PASSAGE /tutorial/ tutorial.ipynbLatest commit Cannot retrieve latest commit at this time. HistoryHistory File metadata and controls Preview Code Blame 408 lines (408 loc) · 324...
Code README GPL-2.0 license CEPICS CEPICS: a comparison and evaluation platform for integration methods in cancer subtyping. Version 1.0.0 R package Author Han Xu, Kuo Song, Ran Duan Maintainer Han Xumyxuxiaohan@outlook.com, Kuo Songuysk@foxmail.com ...
Hi,your work about GLUE is very good,but i have a few question. Your article mentioned that with the use of omic data ,we can build GRN through our method.But i can not find the code. Will you be so kind to provide the code with me? Your...
Lab News PhD Graduation Congratulations Dr. SUN Honglin and Dr. HUANG Ting for achieving doctorate degree. Departmental Commendation Award Congratulations to WIJAYA, Leonardo Nicholas Adi for receiving Departmental Commendation Award for 2023-24. New Mem
To find JupyterLab extensions, search for the npm keyword jupyterlab-extension or the GitHub topic jupyterlab-extension. To learn more about extensions, see the user documentation. The current JupyterLab releases are suitable for general usage, and the extension APIs will continue to evolve for ...