访问fungaltraits数据库需通过其官方网站,首次使用者需完成免费注册流程。注册页面要求填写机构邮箱、所属单位及研究领域等基本信息,提交后系统将自动发送验证链接至注册邮箱,激活账户后方可登录。登录界面提供“忘记密码”功能,用户可通过绑定的邮箱重置密码。数据库主界面分为三大模块:数据检索、数据分析工具及用户指南,侧...
基于FUNGuild和FunFun等前人的研究成果,此研究开发了一个用户友好的特性数据库FungalTraits,可在属和假设种水平上运行。 FungalTraits分别重新注释了真菌10,210个属和Stramenopila 151个属,涵盖17种特征生活方式。 为了将特征状态分配到真菌物种中,对697,413个真菌的ITS序列进行了手动分类和分配。在1%差异阈值条件下,...
Fungal traitsTrophic modesFunctionGuildBioinformaticsHigh-throughput sequencingCommunity ecologyThe cryptic lifestyle of most fungi necessitates molecular identification of the guild in environmental studies. Over the past decades, rapid development and affordability of molecular tools have tremendously improved in...
Supplementary item 2. Instructions for annotators of fungal ITS sequences. Supplementary material 10 (DOCX 22 kb) About this article Cite this article Põlme, S., Abarenkov, K., Henrik Nilsson, R.et al.FungalTraits: a user-friendly traits database of fungi and fungus-like stramenopiles...
On the basis of those sequences we were able to summarise trait and host information into 92,623 fungal species hypotheses at 1% dissimilarity threshold. 展开 关键词: Fungal traits Trophic modes Function Guild Bioinformatics High-throughput sequencing Community ecology DOI: 10.1007/s13225-020-00466-...
This paper explores the potential of using plant root and mycorrhizal fungal traits for understanding soil aggregation. It is established that using traits can increase fundamental understanding of the intricate relationship between plants, symbiotic fungi, and their immediate environment which is the soil...
Plants were grown for 12 weeks under glasshouse conditions and rhizosphere soil was collected and plant traits analysed. Fungal communities were characterised using metabarcoding of the ITS2 region, using the universal primers ITS3F and ITS4R (White et al., 1990). Leaf and root traits ...
The structure of AM fungal community was not correlated with crop functional parameters under high soil fertility, while under low fertility the occurrence of Rhizophagus sp. VTX00105 in roots was the best predictor. Overall, our results demonstrated that local AM fungal inoculants do not affect ...
Initial colonization, community assembly and ecosystem function: fungal colonist traits and litter biochemistry mediate decay rate 来自 EBSCO 喜欢 0 阅读量: 86 作者:LC Cline,DR Zak 摘要: Priority effects are an important ecological force shaping biotic communities and ecosystem processes, in which the...
Through quantitative trait loci mapping studies, numerous genomic regions linked to fungal disease resistance have been reported, providing crucial insights for targeted breeding strategies. Recent advancements in genotyping-by-sequencing, bioinformatics, and associated statistical methodologies have revolutionized...