Solution: shorten/simplify FASTA headers in the genome file before running the RNA-Seq alignment and BRAKER. GeneMark fails! (a) GeneMark by default only uses contigs longer than 50k for training. If you have a highly fragmented assembly, this might lead to "no data" for training. You can...
One major disadvantage of fully-efficient models we have observed in our experience is their inability to simplify reality. Phenotype is influenced by complex terms such as epistasis and genotype by environment interaction, which are often difficult to predict and not always of primary interest [31]...
Adding MD5 hash to fullyQualifiedName and names to simplify DB indexes for lookups and increasing the size of FQN #11960 Merged mohityadav766 merged 28 commits into main from fqn_hash_v2 Jun 19, 2023 +1,221 −727 Conversation 29 Commits 28 Checks 0 Files changed 76 ...
4 FDSOI scalability and global landscape Unfortunately, most of the discussions about the technology scaling simplify the problem to the ability of a given transistor architecture to scale the gate length. This was in fact the focus of many studies in early 2000s to demonstrate aggressively scaled...
For this reason, we have been developing methods to simplify or reduce the FFR model dimensionality [6, 9, 10]. We named this simpler representation of an FFR model a reduced fully flexible receptor (RFFR) model. An RFFR model is achieved by eliminating redundancy in the FFR model through...
To simplify the sensitivity analysis presented later, as already mentioned, it was quite arbitrarily decided to test the influence of a unique numerical value attributed to both γabs,η and γabs,ϕ. For this reason, and for the sake of brevity, the damping intensity is simply referred to...
examples fix missing externals reference to ReactDOM Sep 7, 2016 lib latest build Jan 4, 2019 logo Delete reactive-style-logo.png Sep 6, 2016 src src/index.js:isLastItemDeclarationBodyPattern: simplify regex Jan 4, 2019 .babelrc initial add Jul 17, 2016 .coveralls.yml remove repo token fr...
Simplify DeleteDirectory() API - the force and fastMode args are no longer required DeleteDirectory() is faster since it uses one recursive file listing instead of many Remove .NET Standard 1.4 to improve nuget update reliability, since we need 1.6 anyway 17.1.0 Split stream API into Upload...
Solution: shorten/simplify FASTA headers in the genome file before running the RNA-Seq alignment and BRAKER. GeneMark fails! (a) GeneMark by default only uses contigs longer than 50k for training. If you have a highly fragmented assembly, this might lead to "no data" for training. You can...
Solution: shorten/simplify FASTA headers in the genome file before running the RNA-Seq alignment and BRAKER. There are duplicate Loci in the train.gb file (after using GenomeThreader)! This issue arises if outdated versions of AUGUSTUS and BRAKER are used. Solution: Please update AUGUSTUS and ...