1). SEs have the following characteristics: (1) the degree of SE mediation is at least one order of magnitude greater than that of TEs; (2) the number of TFs bound by SEs and chromosomes related to transcriptional activity is much higher than that bound by TEs(2); (3) genes regulated...
Thus, the results of research in this area can be brought back to the original models, for instance, in the form of regularization techniques. Among other, I am planning to explore the possibility of integrating the time dimension as a new dimension into the model to improve its performance ...
The evolution of Cloud Computing into a service utility, along with the pervasive adoption of the IoT paradigm, has promoted a significant growth in the need of computational and storage services. The traditional use of cloud services, focused on the consumption of one provider, is not valid any...
However, the large NFRs upstream of TSS and downstream of transcription terminal site (TTS) are also depleted of 6mA (Fig. 2b, Additional file 1: Figure S3a). Conversely, 6mA may direct the nucleosome positioning by affecting DNA properties. To verify this assumption, we extracted the ...
concept for leveraging the built-in logical axioms of the ontology to classify patient surface marker data into appropriate diagnostic classes. Di Noia et al. [18] proposed to structure the knowledge associated with NFRs in terms of fuzzy ontology for tool-supported decision making in architectural...
A stronger upstream (US) nucleosome positioning, persistence of NFR under repression on most of the genes, sequence-independence of NFR and requirement of remodeler activities to maintain the chromatin structure in active state, are some of the observations which suggest tDNA NFRs are different ...
AM is formed by more than 80% of the vascular plants [1], indicating that this association provides a significant selective advantage over non-mycorrhizal plants. However, some plant taxa do not form AM, among them theBrassicaceaewith the best-characterized model plant speciesArabidopsis thaliana,...
Leguminous plants are able to form a root nodule symbiosis with nitrogen-fixing soil bacteria called rhizobia. This symbiotic association shows a high level of specificity. Beyond the specificity for the legume family, individual legume species/genotypes
concise theoretical framework for the discrimination of nucleosome-bound versus nucleosome-free regions (NFRs), and iterated the observation of only a small fraction of the complete nucleosomes being well positioned. However, they did not examine whether the used patterns are under any sort of ...
To reveal the mechanism of an inhomogeneous inclusion modifying the wave field, the wave function series solution to SH wave scattering by a cylindrical inclusion whose shear modulus varies continuously in the form of power function in the radial direction is derived in this paper. The contribution...