Over time, educational systems have evolved to meet the changing needs of societies. From traditional one-room schoolhouses to modern institutions equipped with advanced technology, schools have adapted to ensur
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DGCA revealed significant changes in the correlation of 13 genes between control and waterlogging conditions. Finally, we validated 13 genes using the Random Forest (RF) classifier, which achieved 100% accuracy and a 1.0 Area Under the Curve (AUC) score. The SHapley Additive exPlanations (SHAP) ...
The R package MEGENA (v1.3.7) [48] was used to build correlation networks (module compactnessP < 0.05) from differentially correlated species in NAFLD-O relative to CTRL-NAFLD-O and NAFLD-L relative to CTRL-NAFLD-L. Differential correlations were calculated using the R package DGCA (v...
In the previous section, using the given data, the calculated neutrosophic form of the test statistic was determined to be QN=7.16−6IN;INϵ[0,0.1933], where INϵ[0,0.1933]. It is important to note that the value 7.16 represents the test statistic under classical statistics, while ...
of thep-values returned because thep-values are originally derived from the difference of z-scores method, which depends on specifying the correct form for the variance of the sample correlation coefficients, and in turn on the bivariate distribution of the gene expression values. Therefore, DGCA ...
Transcription factors (TFs) can influence each other to form a network, but non-TF genes cannot be directly involved in the network [27]. Therefore, it is believed that transcription factors form the core network. It has also been rigorously proven in a mathematical model of gene networks [...
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