coef=2,adjust='BH')bp=function(g){library(ggpubr)df=data.frame(gene=g,stage=group_list)p<-ggboxplot(df,x="stage",y="gene",color="stage",palette="jco",add="jitter")# Add p-value
“Depending on the total amount of RNA in a cell, one transcript copy per cell corresponds to between 0.5 and 5 FPKM in PolyA+ whole-cell samples according to current estimates (with the upper end of that range corresponding to small cells with little RNA and vice versa).” Although very ...
scale_size(range=c(2, 12))+ scale_x_discrete(labels=function(ego_bp) str_wrap(ego_bp,width = 25))ggsave("ego_bp_up_barplot.png") ego_up_goplot.png ego_up_barplot.png 同样的方式看看下调基因的GO_BP: down_regulated_genes.png 和文献中的GO_BP比较一下 本站仅提供存储服务,所有内容均...
scale_size(range=c(2,12))+ scale_x_discrete(labels=function(ego_bp)str_wrap(ego_bp,width =25)) ggsave("ego_bp_up_barplot.png") ego_up_goplot.png ego_up_barplot.png 同样的方式看看下调基因的GO_BP: down_regulated_genes.png 和文献中的GO_BP比较一下©...
根据原文文献中:Differential gene expression was defined if the fold change >1.5 and P < 0.05 between tumor and normal samples找差异基因 ## 不同的阈值,筛选到的差异基因数量就不一样,后面的超几何分布检验结果就大相径庭。 if(T){ logFC_t=1.5 ...
根据原文文献中:Differential gene expression was defined if the fold change >1.5 and P < 0.05 between tumor and normal samples找差异基因 ## 不同的阈值,筛选到的差异基因数量就不一样,后面的超几何分布检验结果就大相径庭。 if(T){ logFC_t=1.5 ...