To run PCA, select a population of interest, click on the Dimensionality Reduction button within the Analyze tab in SeqGeq’s workspace, and choose PCA:Within that dialog you’ll likely want to normalized selected genes, log transform the parameters (to maximize the dynamic range available for ...
CV—The Coefficient of Variation is a normalized Standard Deviation. CV = StdDev/Mean. In FlowJo, the CV statistic is displayed in percent (i.e. a CV of 0.15 is displayed as 15). 1/CV is a common way to define the Signal to Noise Ratio. SD—The Standard Deviation is a measure of...