This paper presents a pleasantly parallel version of Tompa's exact method for finding short motifs. We use a distributed-memory computer cluster and MPI to run our parallel algorithm and collect data. We vary motif length and allowed substitions. Results indicate good speedup and scalability....
The algorithm of [3] is an approximation algorithm whereas PMS2 is an exact algorithm. Buhler and Tompa have also employed their algorithm to solve the ribosome binding site problem for various prokaryotes [3]. This problem is even more challenging since here the number of input sequences ...
Cbv kgso jn tsginil 14.3 esmassu rrdc krqparentsiortndyaci ja ffwo emrfdo, sbrr rdv rhagp ja tnnccoede shn rprz heret zj c dpsr eltm orsuec er inetdnosiat: lj cff lx prrz hlsdo, rteeh xtz nfpx kwr seacs where ercutnr rveext sna vkcy snullaneprt: ehrietcurrentjc ryv...
TPis the number of true positive sites andFPis the number of false positive sites. It should be pointed out, however, that some results marked with an ‘*’ in Figures1and2may not be satisfactory due to the low specificity of binding sites for the TFs, insufficient number of sequences f...
D. The number of never endings irritated. 查看完整题目与答案 What determines how strong an earthquake is? A. The movements of the earth's shell. B. Where it takes place. C. The injuries it causes. D. How far away it is from a city. 查看完整题目与答案 常规布局飞机失速时 A. 机...
We present a case of a pancreatic cystic lymphangioma in a 60-year-old woman with chronic diffuse symptoms, diagnosed because of newly onset of diabetes mellitus. She was successfully managed with distal pancreatectomy and spleenectomy en-bloc with the cystic mass without any comp...
PanACEA SUDOCU COMBINATION DOSE-FINDING TRIAL SHOWS SUTEZOLID IS A SAFE OXAZOLIDINONEHeinrich, NorbertManyama, ChristinaNtinginya, Nyanda E.Mpagama, StellahLiyoyo, AlphonceMhimbira, FrancisMbeya, BennoSebe, ModulakgotlaWallis, RobertPhillips, Patrick...
We consider the parallel greedy algorithm of Coppersmith, Raghavan, and Tompa (Proc. of 28th Annual IEEE Symp. on Foundations of Computer Science, pp. 260–269, 1987) for finding the lexicographically first maximal independent set of a graph. We prove an Ω(log n) bound on the expected ...
In 31/41-75.6% the number was <3, whereof 17/31-54.8% with just one diverticulum assessed. Regarding the level, in 30/41-73.2% they were subcarinal, but they were also detected in mainstem (2/41-4.9%) and lobar bronchi (with the right upper lobe bronchus most...
Jn iedtecrnud psrgha, osrnveelcy, prv egsed cnz ux dtevesrra nj vpgr istnocerid. Byv neecedffri ja nowsh jn fueirg 14.4. Figure 14.4 An undirected graph (A) versus a directed graph with the same vertices (B). The two graphs are not equivalent; in particular, the latter can’t...