Hello people, I am posting this question aiming to solve another error in ANGSD but related to samtools indexing. As my bam file can not be open by ANGSD, I did some exploration in samtools, what I found: santools view XXX.bam | head wor...
[E::bwa_idx_load_from_disk] fail to locate the index files ERROR: Unable to open index file: Homo_sapiens_assembly38.fasta I have checked the bams: they were aligned with the same genome reference than the one I use to run SvABA. I have also tried to re-indexed the reference genome...
the server to send the full chain containing the Root CA certificate. More - even if send, the certificate verification mechanism that we've recently implemented, would check it again and prepare the final certificate chain that is seen when you've printed the CI_SERVER_TLS_CA_FILE variable....
Fail in building MLPACK with MS Visual Studio 2015 (#1524) Can you post * the modified CMakelists.txt file * the files that are in boost libs folder * cmake command you used to configure mlpack — You are receiving this because you authored the thread. Reply to this email directly, vi...
HarrisLab/analysis_case/sxx128/bdavis_2019/testing/align/rep1/AH-JK-AH779-PE_S6_L006_R1_001.PE2SE # SYS command. line 152 samtools index /mnt/NFS/genetics01/HarrisLab/analysis_case/sxx128/bdavis_2019/testing/align/rep1/AH-JK-AH779-PE_S6_L006_R1_001.PE2SE.bam # SYS command. ...