These four models were hierarchical and the adjacent pairs were statistically compared to examine the measurement invariance. Fourth, the measurement invariance over time and longitudinal cross-gender invariance was examined. The former used the guidelines by Liu et al. [53], while the latter used ...
Optimally, each pair of morphing triangles should be spatially close, but minimizing the distances between all the pairs of triangles is akin to the Traveling Salesman Problem. I took a relatively simpler approach by sorting the two collections of triangles by the X coordinates of the triangle c...
1A, B). In addition to the FXII Thr309 missense mutations, HAE has been associated with either a F12 exon 9 deletion (c.971_1018 + 24del72*)54 or a duplication of 18 base pairs (c.892_909dup) that lead to loss of amino acids Lys305-Ala321 or repetition of amino acids (...
These results validate our prediction of CedA counteracting DksA, and also showed that CedA may have its own IC inhibitory activity. This inhibitory effect of CedA may result from an increased lifetime of RPo, leading to a delayed promoter clearance and, as a result, a reduced reaction turn...
A view of GmJAG1 ChIP-seq data (inner circle, blue), GmJAG1 gene target densities (middle circle, red), transposable element (TE) densities (outer circle, black), and 200 representative GmJAG1-associated paralogous gene pairs (center links, yellow) was shown. Genes harboring GmJAG1 ...
cell identity and function and thus there is a particular interest in TFs in DC. We perform Omni-ATAC-seq experiments of cDC1 and pDC subsets and employ HINT-ATAC to detect footprints within ATAC-seq peaks for each of these two cell types. Next, we estimate changes in binding activity ...
Here, the target activity is set to be the same as the target expression for non-TF genes. c The histograms of Spearman correlations for gene pairs of target genes from the same TF. d Jaccard indices between the ground truth regulons of the synthetic GRN and the regulons inferred by ...
[IFN]-γ), and some cytokine pairs counterbalance each other's effects (e.g., T-helper 2 [Th2] cytokine interleukin [IL]-4 vs. regulatory T cell cytokine TGF-β1) on MC homeostasis. Expression of the death receptor tumor necrosis factor–related apoptosis-inducing ligand and inhibitor ...
In fact, this phenomenon holds true for most pairs of GTEx tissues with available H3K27ac ChIP-seq data we examined (Supplementary Fig. 5). These results support our hypothesis that chromatin states of the TADs, in addition to their genetic properties, influence regulatory decay distances. More...
ABC scores for all RE–gene pairs (within 5 Mb) were calculated using this formula. In this case, a linear distance–power law function was used as a proxy for ‘contact,’ as it has been shown to have a similar performance to Hi-C46. A gene’s own promoter (defined as an RE ...