DFETopKSSSPAlgo – Explain operator for invocations of the TopK hop-limited single source (weighted) shortest path algorithm algorithm, which finds the single-source weighted shortest paths from a source node to its neighbors out to the distance specified by maxDepth. DFETotalNeighborsAlgo – Explai...
The Bellman-Ford algorithm is an algorithm that calculates the shortest path(s) through a weighted digraph or collection of connected nodes or vertices. The "Wexler" in the title text refers to Wexler's algorithm, which is used to deal with the inverse problem of electrical impedance tomography...
The output of the AS function is: GBTour: the best tour found by the algorithm. GBLength: the length of the best tour. Option: a struct containing the input parameters and some additional information about the algorithm. IBRecord: a matrix that records the iterative best solution found at ...
Briefly explain the purpose of the loop, or iteration, structure. Then provide an original example algorithm with the loop structure. If a process is suspended (put into a wait state by an interrupt), will its threads also be suspended? Explain why the threa...
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We used the Walktrap community finding algorithm, based on the idea that short random walks on a network tend to stay in the same community64. In all four tested networks (see main text), the modularity of the observed network was not an outlier in the distribution of modularity values of...
the first five PCoA eigenvectors were used. Co-occurrence analyses were conducted with the cooccur83R package. The walktrap algorithm84was used for defining sub-networks in the co-occurrence network. For OTU-specific tests (LIPA, PGLS, and co-occurrence), only OTUs present in >5% of samples ...
We used the Walktrap community finding algorithm, based on the idea that short random walks on a network tend to stay in the same community64. In all four tested networks (see main text), the modularity of the observed network was not an outlier in the distribution of modularity values of...
A root of a dag is a vertex r such that every vertex of the dag can be reached by a directed path from r. Write pseudocode to determine whether a dag is rooted. Consider the following algorithm to check connectivity of a graph defined by its adjac...
The Kabsch and Sander algorithm as implemented in DSSP was used for secondary structure assignment (45). Structural alignments were carried out with the programs TOP (46) or the LSQ commands in O. Crystal contacts were determined with CONTACT of the CCP4 suite of programs and the Protein-Protei...