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Plant evolution This article is cited by Profiling conserved transcription factor binding motifs in Phaseolus vulgaris through comparative genomics Liudmyla Kondratova C. Eduardo Vallejos Ana Conesa BMC Genomics(2025) Integrative multi-omics data provide insights into the biosynthesis of furanocoumarins and...
The genome of all organisms is spatially organized to function efficiently. The advent of genome-wide chromatin conformation capture (Hi-C) methods has revolutionized our ability to probe the three-dimensional (3D) organization of genomes across diverse
the female reproductive organ undergoes metamorphosis from an oblate spheroid (disc-shaped) gynoecium to a flat, heart-shaped fruit4,12. This shape is adopted as the two valves (seed pod walls) each form one half of the heart protruding laterally from the central re...
regulated by theOryza sativa Grain number, Plant Height and Heading date 7 (Ghd7,aCO-homolog)andCONSTANS-LIKE4 (OsCOL4, CO-homolog) (Choi et al.2014; Endo-Higashi and Izawa2011).However, ifFTsignaling is in place, and has bypassed all suppressors, the rice homolog ofFLOWERING LOCUS D(...
The three-amino-acid-loop-extension (TALE) is a ubiquitous homeodomain transcription factor among plant species involved in regulating plant growth, development, and environmental responses. However, this has not been systematically analyzed or reported
In plant genomes, one such sequence motif – the ACGT core sequence – is functionally important in a variety of promoters that respond to different stimuli like light [12], anaerobiosis [13], jasmonic acid [14] and hormones such as salicylic acid [15], abscisic acid [16–18] and auxin ...
However, similarly with Arabidopsis COP1, the localization of mammalian COP1 could be regulated by light when expressed in plant cells (Wang et al., 1999). In addition, human COP1 possesses intrinsic E3 ligase activity in its RING domain together with the coiled-coil domain in vitro (Dornan...
InC. elegans, genes with high female-biased expression (i.e. up-regulated in females as compared to males) are enriched on the X chromosome and genes with high male-biased expression are depleted43, but genes that show low levels of sex biased expression do not follow this pattern43. To ...
The WRKY transcription factor (TF) gene family expanded greatly in the evolutionary process from green algae to flowering plants through whole genome, segmental, and tandem duplications. Genomic sequences from diverse plant species provide valuable infor