1、先traceback()一下 2、就能看到是出错到20:makeContent.textrepeltree(x) 3、找到对应源代码:geom_text_repel(data = CCAE, segment.colour = "black", aes(x = CCAE[,1], y = CCAE[,2], label = rownames(CCAE)), size= 3) + 4、要是不知道怎么改就先删掉,重新运行一下,出现图片,说明...
geom_point(aes(fill = Stat_cat), size = 3, color = 'black', shape = 21) Add lines p <- p + geom_line(aes(group = Stat_cat), linewidth=0.05) Add Labels p <- p + geom_text_repel(data = filter(df_stats, Season == last(Season)), aes(label = Stat_cat), size = 2.5, ...
Hello, First of all thank you for putting together such a helpful package! I encounter the following error in the plot_cnv() Step: Error in seq.default(x.range[1], x.range[2], length.out = nb_breaks) : 'from' must be a finite number Can ...
◈ 选择不继承ggplot函数的输入变量 (inherit.aes=F),将仅含top/bottom5基因信息的小dataframe传入ggrepel包的文字注释函数 (geom_text.repel(data=,mapping=)),指定与全局相同的x/y轴、注释文字和颜色信息 (aes(x=, y=, label=, color=)),并限定注释大小 (size),排列方式 (direction='x'/'y'),和注...
>xx<-enrichplot::pairwise_termsim(xx)>clusterProfiler::dotplot(xx)>xx<-compareCluster(gcSample,+fun="groupGO",+OrgDb='org.Hs.eg.db',+ont="BP",+readable=TRUE)>clusterProfiler::dotplot(xx)Errorin`geom_point()`:!Problemwhilecomputingaesthetics.ℹErroroccurredinthe1stlayer.Causedbyerrorin`co...
[139] listenv_0.9.0 ggrepel_0.9.3 deldir_1.0-9 [142] Biostrings_2.68.1 graphlayouts_1.0.0 splines_4.3.0 [145] tensor_1.5 hms_1.1.3 ps_1.7.5 [148] igraph_1.5.0 spatstat.geom_3.2-1 reshape2_1.4.4 [151] RcppParallel_5.1.7 BiocManager_1.30.21 nloptr_2.0.3 ...
Error inunpackPkgZip(foundpkgs[okp,2L],foundpkgs[okp,1L],lib,libs_only,:ERROR:failed to lock directory ‘C:\Users\Nano\Documents\R\win-library\4.0’formodifying Try removing ‘C:\Users\Nano\Documents\R\win-library\4.0/00LOCK’ 到C:\Users\Nano\Documents\R\win-library\4.0/00LOCK ...
[76] XVector_0.40.0 utf8_1.2.3 BiocGenerics_0.46.0 spatstat.geom_3.2-1 RcppAnnoy_0.0.20 [81] ggrepel_0.9.3 RANN_2.6.1 pillar_1.9.0 stringr_1.5.0 limma_3.56.1 [86] spam_2.9-1 RcppHNSW_0.4.1 later_1.3.1 splines_4.3.0 lattice_0.21-8 ...
[133] ggrepel_0.9.5 deldir_2.0-4 Biostrings_2.72.0 [136] graphlayouts_1.1.1 splines_4.4.0 tensor_1.5 [139] locfit_1.5-9.9 igraph_2.0.3 spatstat.geom_3.2-9 [142] RcppHNSW_0.6.0 reshape2_1.4.4 futile.options_1.0.1 [145] XML_3.99-0.16.1 lambda.r_1.2.4 renv_1.0.7 ...
Hi, I am using Seurat version '4.3.0' and SeuratObject '5.0.1' to run Pando, but I get an error when I run find_motifs: Error in validObject(.Object) : invalid class "SeuratPlus" object: invalid object for slot "version" in class "Seurat...