epi2me-labs.github.ioPublic fastcatPublic Simple utility to concatenate .fastq(.gz) files whilst creating a summary of the sequences. wf-metagenomicsPublic Metagenomic classification of long-read sequencing data wf-basecallingPublic bed-bugsPublic ...
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The new version of EPI2ME Labs enables running community-developed bioinformatics workflows that have been implemented innextflowas pernf-corestandards. Our software loads workflows straight from GitHub. Sharing your workflows could make your pipelines available to the broader Oxford Nanopore community. Wo...
If your question is not answered here, please report any issues or suggestions on thegithub issuespage or start a discussion on thecommunity. Related blog posts Related blog posts See theEPI2ME websitefor lots of other resources and blog posts. ...
cDNA read preprocessing. Contribute to epi2me-labs/pychopper development by creating an account on GitHub.
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// https://github.com/nextflow-io/nextflow/issues/2660) [ meta + [ is_unaligned: is_unaligned, is_sorted: is_sorted, ds_runids: ds_runids_env.tokenize(','), ds_basecall_models: ds_basecaller_env.tokenize(','), ], paths
v2.3.0 ea5d3c0 Fix Output schema with correct expression matrix paths. Added Spatial plotting of visium data in workflow report for genes specified by --genes_of_interest. Changed The genes to be used for annotating UMAP plots are now specified by --genes_of_interest. Updated Ezcharts to ...
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