Human herpesvirus 7 (HHV-7) is a lymphotropic virus which replicates in CD4+ T cells. The majority of DNA sequences of HHV-7, strain RK, were cloned, and the termini of the viral DNA inserts were sequenced. The clones were found to contain sequences homologous to HHV-6 DNA with the ...
We benchmarked our approach using samples previously sequenced with an Illumina genome skimming strategy10. The utility of this new strategy was demonstrated in a mitophylogenomic analysis of all three tick families (Ixodidae, Argasidae, and Nuttalliellidae). This strategy will be important for use...
Median network analysis of defectively sequenced entire mitochondrial genomes from early and contemporary disease studies. Journal of Human Genetics . 2009; 54 (3):174–181.H.J. Bandelt, Y.G. Yao, C.M. Bravi, A. Salas, T. Kivisild, Median network analysis of defectively sequenced entire...
The orangutan now joins chimpanzees and humans as the third great ape to have its genome sequenced."The orangutan genome is a wonderful resource,"says evolutionary geneticist Svante P??bo of the Max Planck Institute for Evolutionary Anthropology in Leipzig,Germany."It will help clarify how each ...
Fleming K, Muller A, MacCallum RM, Sternberg MJ: 3D-GENOMICS: a database to compare structural and functional annotations of proteins between sequenced genomes. Nucleic Acids Res 2004, (32 Database):D245–50. 10.1093/nar/gkh064 Google Scholar Yeats C, Maibaum M, Marsden R, Dibley M, Lee...
The focus of this study is to characterize the extent and level of mutations in breast cancer samples obtained by tissue microdissection by application of an evaluated full mtDNA genome sequencing protocol. We amplified and sequenced the complete mitochondrial genomes of microdissected breast cancer ...
Webb JR, Holt RA. Exhaustive T-cell repertoire sequencing of human peripheral blood samples reveals signatures of antigen selection and a directly measured repertoire size of at least 1 million clonotypes.Genome Resdoi:10.1101/gr.115428.110
The DNA samples were sequenced, genotyped and subsequently analysed for variant calling for approximately 23.1 Mbp of the Y chromosome. A phylogenetic tree was built using Network 4.6 software.From low coverage whole genome sequencing of 1,194 Sardinian males, we extracted 20,155 phylogenetically ...
Over 1000 individual mosquitoes can be sequenced in a single MiSeq run, and we demonstrate the panel's power to assign species identity using sequencing data for 40 species from Africa, Southeast Asia, and South America. We also show that the approach can be used to resolve geographic ...
For enzymes in the GH55 family of cellulose-degrading genes, for example, much of the previous work has been carried out on fungi. For example, the structure of the protein PcLam55A was derived using the white-rot fungus Phanerochaete chrysosporium, which had been sequenced by the DOE JGI....