The Pfam protein families database in 2019: S. El-Gebali, J. Mistry, A. Bateman, S.R. Eddy, A. Luciani, S.C. Potter, M. Qureshi, L.J. Richardson, G.A. Salazar, A. Smart, E.L.L. Sonnhammer, L. Hirsh, L. Paladin, D. Piovesan, S.C.E. Tosatto, R.D. FinnNucleic Acids...
J ChambersA Hersey
Examples of databases that use profiles to classify proteins include CDD (Marchler-Bauer A. et al. 2015), HAMAP (Lima. T, et al. 2009) and PROSITE (which produces profiles as well as patterns. Sigrist. CJ, et al. 2010). The PRODOM (Servant. F, et al. 2002) database also uses a...
The EMBL/EBI reptile database 来自 钛学术 喜欢 0 阅读量: 25 作者:P Uetz,T Etzold 摘要: currently with a focus on membrane proteins in E. coli, but also comparative studies in Vibrio, Yersinia, etc.被引量: 93 年份: 1996 收藏 引用 批量引用 报错 分享 全部来源 免费下载 求助全文 ...
Introduction to the Biomedical Linked Annotation Hackathon (BLAH)2015 SymposiumJin-Dong Kim1*, Kevin Bretonnel Cohen2, Nigel Collier3, Zhiyong Lu4,Pontus Stenetorp51Database Center for Life Science, Research Organization of Information a... JD Kim,KB Cohen,N Collier,... - 《Bmc Proceedings》...
除了PIR,另一个重要的蛋白质序列数据库是 SWISS-PROT(Protein Sequence Database)(http://www.expasy.ch/sprot/sprot-top.html)。该数据库由瑞士日内瓦大学生化系 A. Bairoch于1986年创建,目前由瑞士生物信息学研究所(Swiss Institute of Bioinformatics,SIB)和欧洲生物信息学研究所(EBI)共同维护和管理。蛋白质序列...
Bottom panel: A display page from the Genome Aggregation Database gnomAD v3.1. The MANE Select pair, along with the RefSeq and Ensembl identifiers, are displayed at the top of the page (indicated by red box). We note that UniProt, another commonly used resource, will update their browser ...
DbfetchInfo: introspection of Dbfetch database meta-informations. db(), formats(), format(), styles() (more to be added here!) Installation $ npm install embl-ebi-rest Examples ENAbrowser varENAbrowser=require('embl-ebi-rest').ENAbrowser; ...
coming centuries. I started to annotate each one about the level of completeness, but realised that in itself was a complex task, and a task that often can be broken out into a matrix of catalog vs species, and mechanism vs species – just to enumerate this task we need a database!
IntAct The molecular interactions database at EMBL-EBI webinarP Porras