首先,将t1图像利用mricron软件由dicom格式转换到hdr/img格式,利用AW公司的MRIcloud分割平台,分割出286或283的结构,但是直接用这个level5下的分割结果可能会导致过精细的分割使得脑区之间的联系计算不正常,同时增加了gretna处理软件的计算复杂度,所以目前是采用回溯的方法回溯到level4 152个脑区或level 3 53...
Gibbs-ringing is an artifact that is often displayed in MRI images as spurious oscillations nearby sharp image gradients at tissue boundaries. This can be corrected using the method of local subvoxel-shifts proposed by Kellner et al., 2015. You can correct your data using the original code -...
Ubuntu18.04安装FSL6.0,MATLAB,mricron 笔者为了处理DTI数据,安装了需要用到的这几个软件,一直在试错一直在解决,能犯的错都犯了,网上超级多的教程和除错方法看了不少,总算解决了一部分问题 = = 安装环境:虚拟机:VMware...,保存退出,激活环境变量:source ~/.bashrc 3、使用FSL-v5.0.9进行涡流校正的时候,报错:...
PyDesigner was inspired by NYU's DESIGNER dMRI preprocessing pipeline to bring pre- and post- processing to every MRI imaging scientist. With PyDesigner, users are no longer confined to specific file types, operating systems, or complicated scripts just to extract DTI or DKI parameters – PyDes...
The purpose of this study was to compare state of the art Free Water Elimination DTI techniques and quantify the specificity of FWE-DTI estimates when extracted from single- and multi-shell dwMRI data. Implemented FWE-DTI routines Regularized Gradient Descent (RGD) FWE-DTI, originally reffered ...
muscbridge/PyDesigner master 6Branches19Tags Code README License PyDesigner Welcome to the official PyDesigner project! PyDesigner was inspired byNYU's DESIGNERdMRI preprocessing pipeline to bring pre- and post- processing to every MRI imaging scientist. With PyDesigner, users are no longer ...
If the QC windows do not appear when pushing the QC buttons, it might mean that you need to install the GLUT library to get MriWatcher to work. You can find the GLUT libraryhere Contact : jprieto[at]med.unc.edu Slicer extension build status:Open the dashboardand search "DTIAtlasBuilder...
master 1Branch52Tags Code Repository files navigation README MIT license DTI Playground DTI Playground is python based NIRAL pipeline software including DMRIPrep (dmriprep), DMRIAtlas (dmriatlas) Documentation For detailed information about installation and usage, please go here:Documentation ...
master BranchesTags Code Repository files navigation README eDTI Preprocessing Table of Contents Dicom conversion Denoising Gibbs ringing correction Correct for distortions: EPI susceptibility Create a mask for your dmri data Eddy current correction ...
PyDesigner was inspired byNYU's DESIGNERdMRI preprocessing pipeline to bring pre- and post- processing to every MRI imaging scientist. With PyDesigner, users are no longer confined to specific file types, operating systems, or complicated scripts just to extract DTI or DKI parameters – PyDesigne...