Differential expression Genes(DEGs) statistical result in different organs and species.Jianguo ZengYisong LiuWei LiuXiubing LiuFuqing LiuPeng HuangPengcheng ZhuJinjun ChenMingming ShiFang Guo
In this regard, significant DEGs were first recognized by comparing the gene expression profiles between mtKRAS (HCT-116 and LoVo) and wtKRAS CRC cells (SW48). A total of 1979 and 1984 genes reached the criteria of 1.5-fold changes and adjusted p-value < 0.05 in HCT-116 versus SW...
表达谱差异分析(differential expression profiling)主要包括基因表达谱(gene expression profiling) 和蛋白质表达谱(protein expression profiling) 。大规模表达谱分析已经成为认识疾病分子机制的有利方法,在癌症研究等方面取得了一定的进展。成功的表达谱分析基于实验及其过程分析的有机结合。实验过程从关注的疾病开始,首先收...
Aims:To identify potential molecular biomarkers in breast cancer,we screened the DEGs of breast cancer,detected the expression of NUF2 in breast cancer tissues and verified its clinical value.Methods:Gene expression profile datasets of BC were downloaded from GEO and TCGA databases to screen the DEG...
positive and negative gene expression by silencing the transcription39. This is accomplished by the expression ofMYB-repressor genes that control the synthesis of lignin and modulation of secondary cell wall formation in plants during the stress40. TheMYBTFs were induced in the tolerant genotype (Ca2...
This study aimed to identify co-expressed differentially expressed genes (DEGs) in quiescence and senescence of osteosarcoma (OS) U2OS cells and investigate their biological functions. GSE94805 from Gene Expression Omnibus database was extracted, involving 12 samples of OS U2OS cells (4 quiescence, ...
Differentially expressed genes (DEGs) with consistent ALS versus CTL expression differences across studies were identified. Results: The analysis identified 222 ALS-increased DEGs (FDR 0.80) and 278 ALS-decreased DEGs (FDR <0.10, SMD < -0.80). ALS-increased DEGs were lin...
5)analysis of genes differential expression基因差异表达分析 6)significant analysis of microarrays (SAM)基因表达差异显著性分析方法 1.In the first step,significant analysis of microarrays (SAM) was used to select a subset of differentially expressed genes (DEGs).第一步,采用基因表达差异显著性分析方法(...
Expression patterns of eight DEGs measured using qRT-PCR confirmed RNA-seq results. Thus, several interesting genes described here warrant future molecular mechanistic studies to learn their roles in fiber formation toward improving flax fiber quality through molecular breeding. Abbreviations 4CL: 4-...
In addition, correlation analysis of DEGs expression pattern between RNA-Seq and q-PCR, which indicated that the correlation between RNA-Seq and q-PCR was significant, is shown in Supplementary Table S5. Genes related to photosynthesis-antenna proteins and photosynthesis Photosynthesis in green ...