Differentially expressed genesDifferentially alternative splicing genesCommon pathological mechanisms of three bacterial pathogens to American eels (Anguilla rostrata) was firstly reported.Similar pathological alterations were highlighted by central melanin engulfing cells and bleeding.The same as DEGs, alternative...
From 21 datasets, we found 30 DEGs and David tool was used to retrieve their gene symbol and biological annotation. We selected the most significant ranked genes from the list of differentially expressed genes. For disease-gene curation, these genes were text mined using CTD (Comparative Toxicoge...
The differentially expressed genes (DEGs) of M. oryzae in the infected leaf and panicle tissues were analyzed. Gene ontology (GO) enrichment analysis of DEGs revealed that M. oryzae genes involved in the biological processes were different at leaf and panicle stages. Furthermore, Kyoto ...
DEGs: differentially expressed genes; DeTFs: differentially expressed transcription factors; FHA: forkhead-associated domain; GDP: guanosine diphosphate; GTP: guanosine triohosphte; GO: gene ontology; HSF: heat shock transcription factor; KEGG: kyoto encyclopedia of genes and genomes; LOB: lateral orga...
The primers of genes for qRT-PCR. Additional file 2: Supplementary Table S2. Top 50 differential expressed metabolites (DEMs). Additional file 3: Supplementary Table S3. Differential expressed genes (DEGs). Additional file 4: Supplementary Table S6. Genes of module. ...
[1,2]. The analysis of gene expression data has become a standard for studying differences in cells and tissues, partly driven by advances in next-generation RNA sequencing (RNA-Seq) technologies. By identifying differentially expressed genes (DEGs), we can pinpoint genes involved in the onset...
(a) GO analysis of differentially expressed genes (DEGs) based on the molecular function (Red) and biological process (Blue). (b) KEGG pathway analysis of DEGs. (c) Functional enrichment analysis by Toppcluster. (d) Cluster of miR-23b and its target DEGs. (e) Protein–protein interaction...
5)analysis of genes differential expression基因差异表达分析 6)significant analysis of microarrays (SAM)基因表达差异显著性分析方法 1.In the first step,significant analysis of microarrays (SAM) was used to select a subset of differentially expressed genes (DEGs).第一步,采用基因表达差异显著性分析方法(...
RNA-seq bioinformatics data was confirmed by RT-qPCR on a number of genes. Results indicate that the greatest number of significantly differentially expressed genes (DEGs) occurred in April when dormancy release and bud break normally occur but are delayed in Line T166. Genes involved in storage ...
Ingenuity Pathway Analysis (IPA) software and DESeq2 analysis were then used to analyse conical pathways and differentially expressed genes and transcription factors in each group. Results Our work highlighted that there were 1720 common differentially expressed genes (DEGs) between heart failure (HF)...