In this equation, is the silhouette score obtained from the optimised DBSCAN algorithm, and is the outlier score derived from the IQR method. The parameter is a user-defined weighting factor that controls the relative importance of DBSCAN clustering and IQR-based outlier detection . A higher empha...
Although subspace clustering methods based on implicit features have been proposed to separate very different conformations7,8,9, cryo-EM maps reconstructed from a series of two-dimensional images categorized within the same group still contain dynamic information concerning structural fluctuations and ...
The high throughput, cost effective and sensitive quantification of cell adhesion strength at the single-cell level is still a challenging task. The adhesion force between tissue cells and their environment is crucial in all multicellular organisms. Inte
Laser-based powder bed fusion (L-PBF) technology stands out for its ability to create complex, high-performance parts, optimizing design freedom and material efficiency. Despite technical and financial challenges, it is attractive to industries where per
Liu RH, Meng JL: MapDraw: a microsoft excel macro for drawing genetic linkage maps based on given genetic linkage data. Yi Chuan. 2003, 25 (3): 317-321. PubMed Google Scholar de Givry S, Bouchez M, Chabrier P, Milan D, Schiex T: CarthaGène: multipopulation integrated genetic and...
6.1 [23]. Genetic differentiation amongst the surveyed accessions was then investigated using the Bayesian, model-based clustering algorithm implemented in the software package STRUCTURE [24]. Briefly, individuals were assigned to K population genetic clusters based on their multi-...
The genetic structure, based on the Bayesian clustering approach, was implemented by Structure v 2.3.4 [53]. This analysis was conducted using 580 SNPs in linkage equilibrium (LE; r2 < 0.5) identified using Golden Helix SNP & Variation Suite v 8 (Golden Helix Inc., Bozeman, MT, USA...
VESPER represents a density map with a unit vector at each grid position, which points toward a neighboring local density maximum point. The mean shift algorithm, a non-parametric clustering approach, is used for this task. First, the grid spacing of a map is converted to 7 Å. Then,...
Bin genotype was obtained for each individual and used for construction of genetic map. Based on filtering of two parents SNP, a total of 101902 polymorphic SNP was obtained on the whole genome one SNP per 3.6 kb on average. Bin map was constructed using MSTMap software51. Data of the ...
This study aimed to present a well-known clustering algorithm, named density-based spatial clustering of applications with noise (DBSCAN), to network space and proposed a new clustering algorithm named network space DBSCAN (NS-DBSCAN). Basically, the NS-DBSCAN algorithm used a strategy similar to...