MKL_DSS_SYMMETRIC_STRUCTURE_COMPLEX MKL_DSS_SYMMETRIC_COMPLEX MKL_DSS_NON_SYMMETRIC_COMPLEX The information about the matrix type must be defined indss_define_structure. Provide the actual locations of the non-zeros by means of the arraysrowIndexandcolumns(seeSparse Matrix Storage Format). ...
Due to the relatively low sequencing depth and limited coverage of single-cell RNA-seq data, the probabilities of many AS events cannot be reliably estimated for all the single cells in a dataset. Therefore, the AS probability matrix greatly suffers from frequent missing values (marked as NA)....
To address this issue, we conceived of a simple approach in which for each gene only the edges reflecting the most highly correlated genes are retained (Edge Per Gene: EPG; where EPG3 = retaining 3 edges per gene). These are assembled into a matrix in which a gene may retain additi...
# matrix, while avoiding NaN values. Warning, weighted mean does not work @@ -271,9 +262,9 @@ def __init__( self, data_targ, data_pred, expr_fit, # TODO: replace by Expression instance data_targ_addtest=None, data_preds_addtest=None, expr_fit, data_targ_addtest=None, # TODO...
[24]. Also, different strains ofN. glabratushad slightly different sets of adhesins. Experimental validation of adhesins has so far been sparse, with only a few specific families being studied in depth inN. glabratus(EPA family, AWP family and PWP family) [25,26,27,28,29], therefore ...