a, UMAP plots of benign breast epithelial cells and BC cells for all snRNA (left) and snATAC (right) samples. Tumor cells colored by PAM50 subtype.b, Heatmap of top 15 DEGs in snRNA-seq data from benign breast duct cells. A subset of genes from each benign cell type is highlighted ...
L_EncodeABIC L_EndCompressBuffer L_EndFastMagicWandEngine L_EnumFileGeoKeys L_EnumFileTags L_EnumFileTags2 L_EnumMarkers L_ExpandPage L_ExpandRow L_ExpandRows L_ExtractAttachment L_ExtractMessageFromBitmap L_ExtractObjects_AddObject L_ExtractObjects_CalcContentBound L_ExtractObjects_CalcRegion L...
2a. g, Percent of enhancers accessible/open according to DNase-seq in different number of cell lines ranging from enhancers closed in all cell lines (0 - yellow) to enhancers open in many/all (125 - red) cell lines assayed by DNase-seq in ENCODE. h, Mutual enrichment of transcription ...
Like phylogenomics for species classification, transcriptomic (and epigenomic) classification is a good proxy of cell type classification as the gene regulatory mechanisms that encode and maintain cell type identities are embedded in the transcriptomes and epigenomes. This core concept has led to a ...
DefineFunction(array('name'=>"imap_scanmailbox",'desc'=>"Returns an array containing the names of the mailboxes that have content in the text of the mailbox.\n\nThis function is similar to imap_listmailbox(), but it will additionally check for the presence of the string content inside...
A secret communication method via web pages by embedding special space codes in HTML text to encode message bits in triplets is proposed. The codes, replacing the ASCII space code 20, appear as white spaces as well, creating a steganographic effect. Such codes are found by a systematic ...
secreted proteins (Fig.6). These data suggest a differential CAZy activity in the Secrebiome. Interestingly, the families enriched in the Secrebiome seemed to be focused on binding and receptor functions, which suggest a role in the communication between the microbial communities and of the ...
Importantly, genes within insulated neighborhoods often encode master transcription factors and other regulators of cell identity. Therefore, to assess whether WIZ supports transcriptional insulation at DNA loops, we examined expression of genes within and outside of insulated neighborhoods previously ...
TANC2was recently reported to encode a synapse scaffolding protein interacting with multiple PSD proteins to regulate dendritic spines and excitatory synapse formation14,15. Our initial genetic findings and the strong functional implication warranted the investigation of more individuals withTANC2mutations. ...
Inference and analysis of cell-cell communication using CellChat Nat. Commun., 12 (2021), p. 1088, 10.1038/s41467-021-21246-9 Google Scholar 99 S. Aibar, C.B. González-Blas, T. Moerman, V.A. Huynh-Thu, H. Imrichova, G. Hulselmans, F. Rambow, J.-C. Marine, P. Geurts, ...