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Inspired by our previous work, we present an improved and more integrative computational pipeline for the protein-protein interaction (PPI) network reconstruction in HSV1, together with a newly developed consensus clustering framework, which allowed us to extend the analysis beyond binary physical ...
Performing clustering analysis is one of the important research topics in cancer discovery using gene expression profiles, which is crucial in facilitating the successful diagnosis and treatment of cancer. While there are quite a number of research works which perform tumor clustering, few of them con...
它提供一个普遍的框架,用来做consensus clustering。Bioconductor链接为https://bioconductor.org/packages/cola/,论文链接为https://doi.org/10.1093/nar/gkaa1146。 在cola框架中,consensus clustering被标准化为若干个步骤,其中某些关键步骤中,用户可以自定义自己的方法。如下图所示: 我提出了一个简单但是有效的方法,...
Consensus clustering has emerged as a powerful technique for obtaining better clustering results, where a set of data partitions (ensemble) are generated, which are then combined to obtain a consolidated solution (consensus partition) that outperforms all of the members of the input set. The divers...
ConsensusClusteringforUrbanLandUseAnalysisusingCell PhoneNetworkData Abstract Pervasivelarge-scaleinfrastructures,suchascellphonenetworks,havetheabilitytocaptureindividual digitalfootprints,andasaresult,generatedatasetsthatprovideanewvisiononhumandynamics.Inthis context,cellphonesandcellphonenetworks,duetoitsubiquity,canbecons...
Conclusion: Ourcluster analysis identif i ed clinically distinct phenotypes with differing mortality risks in hospitalizedpatients with dysmagnesemia. Future studies are required to assess the application of this MLconsensus clustering approach to care for hospitalized patients with dysmagnesemia.Keywords: ...
An Interactive Consensus Clustering framework for Cross-platform data analysis - GitHub - bioinformatist/CrossICC: An Interactive Consensus Clustering framework for Cross-platform data analysis
consensus clustering, weighted gene co-expression network analysis, and obtaining of hub genes and regulatory network. (B,C) Heatmaps of 276 ferroptosis-related genes plotted by AS status and sex, respectively. Red indicates high expression and blue indicates low expression. GEO, Gene Expression ...