library(devtools) install_github("jokergoo/ComplexHeatmap") 热图和简单注释会自动生成图例,并放置在图像右边区域。而复杂注释默认不会显示图例,但是可以手动构建和添加 所有图例都是通过Legend()函数来构造的,不论是单个图例,还是多个图例都属于Legends类 热图和注释的图例可以分别在Heatmap()函数的heatmap_legend_p...
install. Packages("ComplexHeatmap") library(ComplexHeatmap) 使用BiocManager和BiocManager安装时均报错 Error in library(ComplexHeatmap) : 不存在叫‘ComplexHeatmap’这个名字的程辑包 原因是ComplexHeatmap与R版本不兼容 Warning message: package ‘ComplexHeatmap’ is not available for Bioconductor version '3....
1.1 载入ComplexHeatmap包 #if (!requireNamespace("BiocManager", quietly = TRUE))# install.packages("BiocManager")#BiocManager::install("ComplexHeatmap")library(ComplexHeatmap) 1.2 载入数据 为更贴近生信使用场景,直接使用内置的基因表达数据 expr = readRDS(paste0(system.file(package = "ComplexHeatmap"...
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("ComplexHeatmap") ### 2.2 导入R包 library(ComplexHeatmap) library(openxlsx) ## 3.R包简要信息 ### 3.1 Description # Package: ComplexHeatmap # Type: Package # Title: Make Complex Hea...
expr=readRDS(paste0(system.file(package="ComplexHeatmap"),"/extdata/gene_expression.rds"))#查看数据str(expr)expr[1:4,c(1:4,25:27)] 代码语言:javascript 复制 拿到一个新数据后,除了检查[1:4,1:4]外,也许还需要看看最后几列,另外还需要观察列名称的规律。
佳名IP属地: 海南 0.062020.03.23 15:27:29字数 0阅读 3,260 BiocManager::install("ComplexHeatmap") ©著作权归作者所有,转载或内容合作请联系作者 2人点赞 R语言 更多精彩内容,就在简书APP "小礼物走一走,来简书关注我" 赞赏支持还没有人赞赏,支持一下 ...
install.packages("ComplexHeatmap") library(ComplexHeatmap) 创建热图对象:使用Heatmap()函数创建一个热图对象,并设置相关参数,例如数据矩阵、颜色映射等。例如: 代码语言:txt 复制 heatmap_obj <- Heatmap(data_matrix, col = colorRamp2(c(-1, 0, 1), c("blue", "white", "red"))) ...
#if(!requireNamespace("BiocManager", quietly = TRUE))# install.packages("BiocManager")#BiocManager::install("ComplexHeatmap")library(ComplexHeatmap) AI代码助手复制代码 1.2 载入数据 为更贴近生信使用场景,直接使用内置的基因表达数据 expr= readRDS(paste0(system.file(package ="ComplexHeatmap"),"/extda...
When I tried to install ComplexHeatmap package in R-3.5.1, it said that dependency ‘GetoptLong’ is not available, and there was no information about which version of GetoptLong I need to install. > BiocManager::install("ComplexHeatmap") ...
Complex heatmaps are efficient to visualize associations between different sources of data sets and reveal potential patterns. Here the ComplexHeatmap package provides a highly flexible way to arrange multiple heatmaps and supports various annotation graphics....