We demonstrate the method's capability by aligning structures in difficult benchmark sets: curated alignments in the SISYPHUS database, as well as SISY and RIPC sets, including non-sequential and non-rigid-body alignments. On the most difficult RIPC set of sequence alignment pairs the method ...
While those collections are helpful to discover existing implementation, the problem we stated in the introduction is still present: one needs to satisfy all the required implementation dependencies, learn how to instantiate each method, and format inputs and outputs to suit its needs. Among such r...