13-34, 10.1093/oxfordjournals.molbev.a040335 View in ScopusGoogle Scholar 8 M. dos Reis, R. Savva, L. Wernisch Solving the riddle of codon usage preferences: a test for translational selection Nucleic Acids Res, 32 (2004), pp. 5036-5044, 10.1093/nar/gkh834 View in ScopusGoogle Scholar...
Microsatellites (simple repeat sequences, SSRs) are typically tandem sequences of up to 6 base pairs in eukaryotic genomes38. In this investigation, a total of 77 SSRs were identified in the mitogenome ofP. frutescens(Fig.2C), dominated by tetrameric repeats, accounting for 27.35%(27) of t...
The codon usage in individual protein genes has been calculated using the nucleotide sequence obtained from the GenBank Genetic Sequence Database. Sum of the codon use of each organism has been also calculated. The data files can be obta... Y Nakamura,Gojobori, T.,Ikemura, T. - 《Nucleic ...
paralogs within SSD pairs. The CAI compares the codon usage of a gene to codon usage in highly expressed genes; hence, the reduction in the CAI values of derived paralogs suggests that selection for optimal codon usage has been relaxed in the derived copy. Puzzlingly, we failed to detect an...
Codon usage tabulated from international DNA sequence databases: status for the year 2000. Nucleic Acids Res. 28, 292–292 (2000). 42. Subramanian, K., Payne, B., Feyertag, F. & Alvarez-Ponce, D. The codon statistics database: a database of codon usage bias. Mol. Biology Evol. 39...
Codon usage tabulated from international DNA sequence databases: status for the year 2000. Nucleic Acids Res. 28, 292–292 (2000). 42. Subramanian, K., Payne, B., Feyertag, F. & Alvarez-Ponce, D. The codon statistics database: a database of codon usage bias. Mol. Biology Evol. 39...