When compared to manual designs, results demonstrate that CoGenE produces superior designs for three application domains: face recognition, speech recognition and wireless telephony.;While CoGenE is well suited to applications that exhibit a streaming behavior, multithreaded applications like ray tracing ...
Gene Co-Expression Networks Gene expression is the process by which the information encoded in a gene is used to synthesize a gene product (i.e., a protein or RNA). Transcription is the first step of gene expression, in which the DNA of the gene is copied intoRNA.Gene co-expression net...
A major role for gene co-option in the evolution of development has long been assumed, and many recent comparative developmental and genomic studies have lent support to this idea. Although there is relatively less known about the molecular basis of co-option events involving developmental pathways...
Gene co-expression in the interactome: moving from correlation toward causation via an integrated approach to disease module discovery Paola Paci, Giulia Fiscon, Federica Conte, Rui-Sheng Wang, Lorenzo Farina & Joseph Loscalzo npj Systems Biology and Applications volume 7, Article number: 3 (2021...
方法/步骤 1 根据基因在样本中的信号表达值，利用基因间的相互作用（相关系数）来拟合基因的无标度网络关系，构建基因间的共表达网络，结果样式如图。点：图中每个圆点代表一个基因。2 颜色：对于两分组（例如实验组和对照组），红色点为上调基因，蓝色为下调基因，对于多分组（例如 组1，组2，组3），由于差异...
First, we identify suitable microarray experiments that derive gene sets related to ovary activation. We then use the computer software suite Genomatix Pathway System (Genomatix, Munich) to evaluate whether co-citation networks can adequately explain variation in this trait. From the networks inferred,...
Therefore, we created a whole-body map of sex differences in gene co-expression, based on gene co-expression and expand on the overarching sex-biased pathways. Next, we analyzed gene co-expression patterns and their regulation by sex down to the tissue level. Lastly, we determined whether sex...
Plachetzki DC, Pankey MS, Johnson BR, Ronne EJ, Kopp A, Grosberg RK. 2014. Gene co- expression modules underlying polymorphic and monomorphic zooids types in the colonial hydrozoan Hydractinia symbiologicarpus. Integr Comp Biol 54:276-83....
Gene-for-gene coevolution, a specific form of reciprocal evolutionary change based on the idea that, if one member of a coevolving relationship has a gene that affects the relationship, the other member has a gene to counter this effect. These genes evol
In this study, we applied the weighted gene co-expression network analysis to the existing microarray mRNA and lncRNA expression data obtained from the breast tissues of TNBC patients to find the hub genes and lncRNAs involved in TNBC. Functional enrichment was performed on the module that ...