总之,这两种方法配合起来使用入手一个R包还是蛮快的。 2. R 中的cluster包总结: 1)pvclust: 这个包是为hierarchical clustering的检测专门设计的,而且特别适合用在microarray的data上面,看到这篇论文的cited次数为300+就知道其受欢迎程度了。 这个包解决的问题就是:在microarray data中,sample数量是固定的,我们根据这...
(iin6:100) { set.seed(i)kinaseAnno[[i]]<-paste("p", sample.int(nrow(simuData),size=50),sep="_") } names(kinaseAnno)<-paste("KS",1:100,sep="_")#run CLUE with a repeat of 5 times and a range from 2 to 10set.seed(2)clueObj<-runClue(Tc=simuData,annotation=kinaseAnno,...
make default for makeMissingDiss depend on sample size Oct 12, 2019 update2.0.md add update on 2.0 May 2, 2018 update2.4.md add 2.4 update in place of 2.2 Mar 8, 2019 README R package: clusterExperiment Functions for running and comparing many different clusterings of single-cell sequencin...
sql_mode='STRICT_TRANS_TABLES,NO_ZERO_IN_DATE,NO_ZERO_DATE,ERROR_FOR_DIVISION_BY_ZERO,NO_ENGINE_SUBSTITUTION'# connection # back_log=500interactive_timeout=300wait_timeout=1800lock_wait_timeout=300max_user_connections=800skip_name_resolve=1max_connections=2500max_connect_errors=1000#table cach...
Starting from a sample of K points in set X as initial cluster centers (centroids μj0), at each iteration k, the algorithm assigns each point in X to the nearest centroid μjk and then computes the centroids μjk+1 of the new partition. The procedure is guaranteed to decrease the ...
Performing the restoration in cluster B 1. The sample uses the resource inventories shown below to perform the restoration (migration). apiVersion: velero.io/v1 kind: Restore metadata: name: migrate-restore namespace: velero spec: backupName: migrate-backup includedNamespaces: - nginx-example...
In the past decades, the basic principles of the Par complex assembly and its functions in cell polarity in diverse cell types have been reasonably well established2,3,4,8. However, how are the Par proteins themselves recruited and highly concentrated at very restricted membrane domains to set ...
In observa... K Barbary,G Aldering,R Amanullah,... - IOP Publishing 被引量: 0发表: 2012年 The extended hubble space telescope supernova survey: The rate of core collapse supernovae to z ～ 1 (Review) We use a sample of 45 core collapse supernovae detected with the Advanced Camera...
Human settlements are usually nucleated around manmade central points or distinctive natural features, forming clusters that vary in shape and size. However, population distribution in geo-sciences is often represented in the form of pixelated rasters. R
The spatial organization of genes within plant genomes can drive evolution of specialized metabolic pathways. Terpenoids are important specialized metabolites in plants with diverse adaptive functions that enable environmental interactions. Here, we repo