方法也比较简单,先取出pocket的结构和序列信息,将序列作为query去AlphaFoldDB中进行搜库,找同源的蛋白,再对这些找到的蛋白用TM-align做结构相似性比对,取出其中较为相似的蛋白质作为有效数据,从而实现数据增强。 DrugCLIP在很多数据集上的表现都非常好,几乎...
Hafner M, Landthaler M, Burger L, Khorshid M, Hausser J, Berninger P, et al. Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP.Cell2010;141:129−41. Konig J, Zarnack K, Rot G, Curk T, Kay...
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提取自监督相关信息。最近的研究表明,自监督模型DINO的最后注意力层嵌入的 Patch 相关信息可以帮助突出图像中的目标。作者在这里使用Value嵌入,观察到它们的关联性比Key和 Query 嵌入(更多详情见补充材料A.2节)更细。作者提取这样的自监督特征 ξ(X)∈RN×dξ ...
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