Moreover, during cell division, chromatin condenses to form a chromosome and the chromosome is double-stranded with an X shape. The two strands are connected to the center through a region known as the centromere.Figure 7: Chromosome diagram with labeled parts. The chromosome consists of sister...
For each block diagram in (e) and (g), the centerline represents the median value; the boxes show the 25th and 75th percentiles; and the last of the whiskers represent the minimum and maximum values. Source data are provided as a Source Data file. Full size image...
Expression level of genes with different types of chromatin interactions. ***P < 0.001.iBoxplots showing the expression level of BP genes (basal), anchor genes with different degrees, and rest genes without H3K4me3 modification.jColumn diagram showing the statistics of PPI and PDI loops in ...
Colours in the diagram of the root tip indicate the corresponding cell type. c Enrichment of accessibility of proximal regulatory elements for marker genes as identified by single-cell RNA-seq. Dot diameter, proportion of cluster cells with proximal regulatory elements for a given gene; colour, ...
The ORC anti- bodies utilized in these experiments have been previously used to study the binding of cell cycle-related proteins at human origins of replication using chromatin immuno- precipitation (ChIP) technology [32,33]. We found many chromatin fibers with no visible replication activity dur-...
Although the overall structure of chromatin architecture is very robust across organs and growth conditions, detailed analyses of chromatin folding revealed it can be modulated during development19, depending on cell type20 or in response to changes in environmental conditions21. In plants, some changes...
their position of the corresponding gene.BVenn diagram illustrating distribution of annotated THSs among stress treatments.CMotif analysis in promoters of THSs found only in control, D1, D2 and D3 state. The names of the interacting transcription factors in database are given on the right panel...
In response to drought stress (DS), plants undergo complex processes that entail significant transcriptome reprogramming. However, the intricate relationship between the dynamic alterations in the three-dimensional (3D) genome and the modulation of gene
The presence of the cell wall in plant cells makes it difficult for antibody to penetrate the cells. As an alternative, intact nuclei were used in the assay (Fig. 2a). The other unknown was the amount of nuclei that should be used in each CUT&Tag reaction. We found it was difficult ...
in the 2 kb region upstream of the TSS is plotted against expression log2FC. Genes shared between the 15-min and 24-h time points are shown (green = signal gain; orange = signal loss). Linear regression lines are fitted with correlation coefficients (R) andp-values.EVenn diagram ...