5 Cells_Lung_Airway.pkl 6 Nuclei_Lung_Airway.pkl description 0 immune sub-populations combined from 20 tissue... 1 immune populations combined from 20 tissues of... 2 immune cell types combined from 16 adult human... 3 immune cell types combined from >20 human tiss... 4 intestinal cells...
这篇文章于2023年7月发表于Cancer Cell(IF=50.3,Clearance of senescent macrophages ameliorates tumorigenesis in KRAS-driven lung cancer),是一篇用特殊工具小鼠探讨衰老对肿瘤微环境组分细胞(主要是巨噬细胞和内皮细胞)以及肿瘤进展的影响,相关探究思路和发现比较新颖有趣,感兴趣的同学可以参考一下。 研究意义:细胞...
additional criteria: (1) cell types appeared in more than two tissues; (2) cell types with a total number of entries greater than 5; (3) more specific cell types were grouped into general cell types (e.g., entries of the epithelial cell of lung were integrated into epithelial cell ...
Human_Lung_Atlas预测 _, ax = plt.subplots(1, 1, figsize=(5, 5)) predictions = celltypist.annotate(adata, model = 'Human_Lung_Atlas.pkl') dp = celltypist.dotplot(predictions, use_as_reference = 'leiden_'+res, filter_prediction=0.2,use_as_prediction = 'predicted_labels',return_fig=T...
1c, e–h). Importantly, this observed biphasic response was also observed in cell proliferation rates (Supplementary Fig. 1c), a well-known downstream effect of mechanosensing and YAP28. The biphasic response was also generalizable to other cell types (lung endothelial and epithelial cells, ...
Spatial omics data are clustered to define both cell types and tissue domains. We present Building Aggregates with a Neighborhood Kernel and Spatial Yardstick (BANKSY), an algorithm that unifies these two spatial clustering problems by embedding cells in a product space of their own and the local...
In non-small cell lung cancer (NSCLC), naïve B cells have been shown to inhibit tumor growth [15]. However, the B-cell subtypes involved in MIBC and their functions are still not fully characterized. Tertiary lymphoid structures (TLSs) are organized aggregates of immune cells that form ...
We provided a tutorial of using scMulan forcell type annotation (see tutorial). Currently, scMulan supports zero-shot annotation of human cell types in seven organs including Heart, Lung, Liver, Bone marrow, Blood, Brain, and Thymus.
Difficulty in the establishment of long‐term cancer cell lines of certain types of tumors, Cell culture environment is different from that of the original tumor, Loss of the natural heterogeneity of the tumor or tissue [77, 78]. 6.2. Cell culture conditions On the basis of different experimen...
Little is known as to the effect of electric field treatment (EFT) on the lung. To determine if EFT associates with changes in lung immune cell infiltration, we used a mouse model with varying methods of EFT application and measured cells and soluble mediators using flow cytometry and cytokine...